Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC123769.1-201ENST00000530992 3192 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 DHX40P1-201ENST00000588725 1412 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-1243P-201ENST00000364028 107 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-522P-201ENST00000364497 107 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 MIR19A-201ENST00000384878 82 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-903P-201ENST00000391270 109 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 METTL15P3-201ENST00000415522 1221 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL713922.1-201ENST00000416477 747 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 FTOP1-201ENST00000419363 861 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 FTH1P1-201ENST00000437933 532 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 NOP56P2-201ENST00000447491 769 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 MTND1P9-201ENST00000453775 944 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 Y_RNA.635-201ENST00000459041 101 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 RNA5SP92-201ENST00000516437 110 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 Y_RNA.718-201ENST00000517110 102 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 EEF1B2P2-201ENST00000519625 676 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 RPL7P20-201ENST00000520308 745 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AP005435.4-201ENST00000529514 284 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC024224.1-201ENST00000538284 609 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC068631.3-201ENST00000538831 225 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 LSM3P2-201ENST00000551246 273 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL591767.3-201ENST00000554632 525 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 HMGN2P47-201ENST00000559378 272 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC027796.1-201ENST00000575593 512 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL121992.2-201ENST00000606262 256 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC023813.4-201ENST00000607580 580 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL352984.2-201ENST00000611153 546 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC040896.1-201ENST00000613819 479 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC037198.3-201ENST00000616754 526 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC099494.2-201ENST00000623371 978 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AL133216.2-202ENST00000634512 349 ntBASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.45□□□□□ -1.38
DEPDC4Q8N2C3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 SOCS5P5-201ENST00000402732 1586 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 AC023886.2-201ENST00000321285 411 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-552P-201ENST00000362869 119 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 Y_RNA.301-201ENST00000364990 103 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 RNA5SP172-201ENST00000365061 118 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 ZNF37CP-201ENST00000406795 241 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 AL355862.1-201ENST00000412705 353 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 RPSAP35-201ENST00000413753 818 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 OR1AA1P-201ENST00000419597 916 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 GPM6BP2-201ENST00000432046 144 ntBASIC6.44□□□□□ -1.38
DEPDC4Q8N2C3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms