Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 U3.22-201ENST00000391120 215 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AL035696.2-201ENST00000407941 709 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 DPY19L1P2-201ENST00000426647 915 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AL138878.2-201ENST00000440581 1241 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 RN7SL738P-201ENST00000470264 297 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 RN7SL691P-201ENST00000494487 301 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC231760.1-201ENST00000498002 260 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC008958.1-201ENST00000511047 682 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 RNU6-1308P-201ENST00000516817 103 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC074029.2-201ENST00000551045 634 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC104662.1-201ENST00000604448 511 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 Z82195.1-201ENST00000604558 398 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC116651.1-201ENST00000609724 556 ntBASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC095050.2-201ENST00000510748 1458 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 CYP1D1P-201ENST00000416662 1433 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 SNORD35B-201ENST00000363660 87 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 RN7SKP182-201ENST00000410772 298 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 RPL26P29-201ENST00000415623 438 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 VDAC1P6-201ENST00000430062 855 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 VN1R25P-201ENST00000443385 738 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 VN1R40P-201ENST00000455196 941 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AP002345.1-201ENST00000456493 928 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 RPL29P14-201ENST00000495837 428 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 ACTR6P1-201ENST00000514311 1104 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC069366.1-201ENST00000583159 838 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC019193.2-201ENST00000610012 634 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AP000255.1-201ENST00000610276 676 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC020763.5-201ENST00000623298 430 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 LINC00216-201ENST00000623548 1126 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AL773545.4-201ENST00000637262 310 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AL513478.4-201ENST00000641636 310 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AC009313.2-201ENST00000417893 1941 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 AL049555.1-201ENST00000562834 1933 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 MFSD8-216ENST00000641147 4009 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 NOL8P1-201ENST00000508336 3529 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC50Q8IVM0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 RPL26P37-201ENST00000411983 438 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 FAR2P2-201ENST00000413041 594 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AL732292.1-201ENST00000426692 226 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 ELOCP10-201ENST00000440624 327 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AL627224.1-201ENST00000448334 444 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC093824.1-201ENST00000508796 343 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms