Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 HMGN1P5-201ENST00000448591 263 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AL162591.2-201ENST00000449634 317 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC233982.1-201ENST00000451247 436 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 CEACAMP6-201ENST00000452007 574 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 BX248409.1-201ENST00000455497 255 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 RN7SL817P-201ENST00000480777 288 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC093267.1-201ENST00000489176 961 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC010374.1-201ENST00000503762 1237 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 RN7SKP96-201ENST00000516948 297 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AF186190.1-201ENST00000517470 480 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC010476.1-201ENST00000519111 851 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC087894.1-201ENST00000538359 518 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 SERPINE4P-201ENST00000554978 281 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC073091.2-201ENST00000603205 907 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AL731566.2-201ENST00000618971 317 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 MTCO1P6-201ENST00000481192 1384 ntBASIC4.75□□□□□ -1.65
PRPF39Q86UA1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF39Q86UA1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 ATG4AP1-201ENST00000416893 538 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC140479.3-201ENST00000418944 1126 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC092017.2-201ENST00000427600 362 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC004865.1-201ENST00000442276 1003 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AL929288.2-201ENST00000446368 407 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 RN7SKP82-201ENST00000516786 223 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC034205.1-201ENST00000520621 638 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC009643.1-201ENST00000532030 391 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 CYB5AP5-201ENST00000549779 389 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 CYP2C60P-201ENST00000566088 139 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 TMF1P1-201ENST00000576058 373 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 RN7SL176P-201ENST00000580352 264 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 VN1R88P-201ENST00000596787 292 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC091488.1-201ENST00000604239 660 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC133552.5-201ENST00000604266 540 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AL353726.1-201ENST00000614041 1000 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AL121890.3-201ENST00000618494 516 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 AC004232.3-201ENST00000622977 525 ntBASIC4.74□□□□□ -1.65
PRPF39Q86UA1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF39Q86UA1 SAGE2P-201ENST00000420011 2126 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 HSPD1P14-201ENST00000432666 1618 ntBASIC4.73□□□□□ -1.65
PRPF39Q86UA1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PRPF39Q86UA1 AL512646.1-201ENST00000269395 1077 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms