Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL450338.1-201ENST00000407987 512 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC083875.1-201ENST00000419509 405 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC115283.1-201ENST00000427353 400 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 RPL36AP53-201ENST00000432891 316 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 SKP1P1-201ENST00000438081 489 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 RPL23AP16-201ENST00000441715 421 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL645936.1-201ENST00000441979 518 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL731563.1-201ENST00000442202 214 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC093166.3-201ENST00000448785 303 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 CECR9-201ENST00000453421 199 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 RPL18AP17-201ENST00000455326 198 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 HSPE1P22-201ENST00000456856 327 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC002075.1-201ENST00000457396 676 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC048346.1-201ENST00000510247 144 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC034159.1-201ENST00000513885 583 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 RNA5SP401-201ENST00000515920 127 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC036111.2-201ENST00000533247 901 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 DPPA3P2-202ENST00000557188 1219 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC010653.1-201ENST00000571108 881 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 MIR4307-201ENST00000582802 84 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 SMIM12P1-201ENST00000603004 274 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL080274.1-201ENST00000605565 220 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC097468.3-201ENST00000607956 456 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL161734.1-201ENST00000609720 557 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 DISC2.1-201ENST00000612827 205 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC008115.3-201ENST00000614874 549 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC090617.10-201ENST00000624308 134 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.59□□□□□ -1.52
ATG4DQ86TL0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
ATG4DQ86TL0 AC024587.1-201ENST00000505925 2157 ntBASIC5.59□□□□□ -1.52
ATG4DQ86TL0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
ATG4DQ86TL0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.59□□□□□ -1.52
ATG4DQ86TL0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
ATG4DQ86TL0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.59□□□□□ -1.52
ATG4DQ86TL0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.59□□□□□ -1.52
ATG4DQ86TL0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AL592429.1-201ENST00000403909 1473 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC005725.1-201ENST00000577346 2607 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 GNG5P1-201ENST00000255500 204 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RNU6-1106P-201ENST00000390845 107 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 CISD1P1-201ENST00000393907 327 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RNU4-64P-201ENST00000410795 131 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RN7SKP144-201ENST00000411108 279 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AL953862.1-201ENST00000423016 168 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RPL7P57-201ENST00000423238 740 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC099782.1-201ENST00000425889 474 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AL589872.1-201ENST00000426602 288 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 FTH1P16-201ENST00000435241 552 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 IFNA20P-201ENST00000436840 528 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 OR3D1P-201ENST00000438288 955 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC015983.1-201ENST00000441577 373 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AL445687.2-201ENST00000458156 728 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC083798.1-201ENST00000472671 131 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RN7SL283P-201ENST00000489055 303 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC023194.1-201ENST00000493084 308 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 BTG4P1-201ENST00000510421 183 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC090958.1-201ENST00000511122 351 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 Y_RNA.691-201ENST00000516611 103 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RNA5SP434-201ENST00000516647 121 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms