Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXF1Q12946 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.5□□□□□ -1.85
FOXF1Q12946 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXF1Q12946 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXF1Q12946 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXF1Q12946 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.5□□□□□ -1.85
FOXF1Q12946 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXF1Q12946 MRPS35P3-201ENST00000603189 709 ntBASIC3.5□□□□□ -1.85
FOXF1Q12946 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXF1Q12946 AC099676.1-201ENST00000608886 657 ntBASIC3.5□□□□□ -1.85
FOXF1Q12946 AC103858.2-201ENST00000621471 543 ntBASIC3.5□□□□□ -1.85
FOXF1Q12946 FP236240.3-201ENST00000623061 327 ntBASIC3.5□□□□□ -1.85
FOXF1Q12946 AP002967.1-201ENST00000624203 539 ntBASIC3.5□□□□□ -1.85
FOXF1Q12946 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXF1Q12946 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXF1Q12946 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
FOXF1Q12946 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 BDP1P-201ENST00000582658 1990 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXF1Q12946 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 RNU1-89P-201ENST00000384592 164 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 HSPD1P16-201ENST00000402302 394 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXF1Q12946 CASKP1-201ENST00000412870 582 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXF1Q12946 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXF1Q12946 RPL7P2-201ENST00000427639 268 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.49□□□□□ -1.85
FOXF1Q12946 AL357520.1-201ENST00000441557 453 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXF1Q12946 CYCSP53-201ENST00000455540 265 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXF1Q12946 AC098583.1-201ENST00000480875 255 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 RN7SL323P-201ENST00000494712 295 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.49□□□□□ -1.85
FOXF1Q12946 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXF1Q12946 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXF1Q12946 AP003392.5-201ENST00000607857 415 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 AC024941.1-201ENST00000612250 334 ntBASIC3.49□□□□□ -1.85
FOXF1Q12946 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXF1Q12946 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXF1Q12946 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FOXF1Q12946 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC026951.1-201ENST00000559530 2459 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXF1Q12946 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXF1Q12946 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FOXF1Q12946 FABP12P1-201ENST00000401911 322 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 SNORA81-201ENST00000408493 178 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 NPM1P34-201ENST00000428821 893 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AF228730.2-201ENST00000438784 848 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXF1Q12946 HMGB1P16-201ENST00000447155 540 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXF1Q12946 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC069499.1-201ENST00000489433 509 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 KATNBL1P4-201ENST00000503545 918 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC111000.5-201ENST00000506559 1178 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXF1Q12946 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC022695.1-201ENST00000522089 237 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC090877.1-201ENST00000561418 344 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AC090312.1-201ENST00000580637 348 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AC022916.3-201ENST00000592961 742 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 MIR6798-201ENST00000612887 67 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXF1Q12946 AL354798.1-201ENST00000622505 329 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXF1Q12946 CDRT1-208ENST00000630868 794 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 ATE1-AS1-202ENST00000636460 506 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 AC107021.2-201ENST00000567714 2095 ntBASIC3.48□□□□□ -1.85
FOXF1Q12946 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FOXF1Q12946 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
FOXF1Q12946 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
FOXF1Q12946 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FOXF1Q12946 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
FOXF1Q12946 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
FOXF1Q12946 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXF1Q12946 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXF1Q12946 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXF1Q12946 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms