Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL512427.1-201ENST00000618593 349 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC007275.1-201ENST00000621243 671 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AL138955.1-201ENST00000622881 1040 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN1BQ07699 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SCN1BQ07699 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN1BQ07699 A2MP1-204ENST00000566278 4130 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN1BQ07699 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN1BQ07699 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN1BQ07699 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN1BQ07699 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SCN1BQ07699 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SCN1BQ07699 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SCN1BQ07699 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SCN1BQ07699 RNA5SP183-201ENST00000362452 119 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 RN7SKP44-201ENST00000363602 316 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 RNU6-619P-201ENST00000365146 108 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AL391361.1-201ENST00000405580 489 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.2□□□□□ -1.74
SCN1BQ07699 RN7SKP206-201ENST00000410823 293 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.2□□□□□ -1.74
SCN1BQ07699 LIPT1P1-201ENST00000415870 1186 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 VN1R37P-201ENST00000419096 748 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 Z74021.1-201ENST00000423610 407 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC115285.1-201ENST00000424879 736 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 PRPF38AP2-201ENST00000438179 851 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 ARF4P4-201ENST00000439608 520 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AL353748.1-201ENST00000440753 474 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 RPL23AP33-201ENST00000442301 452 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.2□□□□□ -1.74
SCN1BQ07699 HMGB1P38-201ENST00000490557 577 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 RPS6P4-201ENST00000494693 758 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC108145.1-201ENST00000503770 153 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC026414.1-201ENST00000504046 698 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 ATP5LP3-201ENST00000514223 304 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 Vault.1-201ENST00000516474 102 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC008694.2-201ENST00000517591 306 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCN1BQ07699 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 NMNAT1P1-201ENST00000554095 876 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 OR11J2P-201ENST00000555298 907 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 ZNF971P-201ENST00000562068 1249 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.2□□□□□ -1.74
SCN1BQ07699 AC105254.2-201ENST00000603636 436 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 BNIP3P31-201ENST00000604515 566 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN1BQ07699 AC005156.1-201ENST00000613371 573 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC121761.2-201ENST00000617300 689 ntBASIC4.2□□□□□ -1.74
SCN1BQ07699 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN1BQ07699 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN1BQ07699 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCN1BQ07699 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SCN1BQ07699 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 AC068254.2-201ENST00000623938 3577 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 MTCO1P14-201ENST00000441695 1559 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 RPL23P2-201ENST00000320371 421 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AL021331.1-201ENST00000402817 582 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 RNA5SP239-201ENST00000410218 129 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 MTND4P22-201ENST00000413116 1169 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC009237.2-201ENST00000421358 284 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 SFR1P2-201ENST00000421841 730 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC092832.1-201ENST00000422934 400 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 RPS6P12-201ENST00000432491 726 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AL354714.3-201ENST00000447284 493 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 Z99714.1-201ENST00000450463 807 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AC146507.1-201ENST00000468335 354 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC079841.1-201ENST00000481228 950 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 HIGD1AP14-201ENST00000507617 282 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms