Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC090151.1-201ENST00000520784 730 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 CYCSP28-201ENST00000534284 321 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNA1P78396 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNA1P78396 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.73□□□□□ -1.65
CCNA1P78396 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CCNA1P78396 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNA1P78396 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNA1P78396 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNA1P78396 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNA1P78396 AL592436.1-201ENST00000605135 558 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.73□□□□□ -1.65
CCNA1P78396 AC019278.1-201ENST00000623516 479 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 OR5BE1P-202ENST00000641168 1176 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNA1P78396 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CCNA1P78396 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCNA1P78396 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 AL450992.3-201ENST00000413192 568 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNA1P78396 GOT2P5-201ENST00000433995 546 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNA1P78396 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNA1P78396 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNA1P78396 AC006011.1-201ENST00000442758 349 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 AL500522.2-201ENST00000448562 343 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNA1P78396 HMGN1P8-201ENST00000463578 288 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 AC090013.1-201ENST00000485147 480 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 AC005912.1-201ENST00000495392 255 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.72□□□□□ -1.65
CCNA1P78396 HMGB1P19-201ENST00000517578 577 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNA1P78396 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.72□□□□□ -1.65
CCNA1P78396 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNA1P78396 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNA1P78396 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNA1P78396 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNA1P78396 AL356121.2-201ENST00000624715 780 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 MIR6715B-201ENST00000637172 77 ntBASIC4.72□□□□□ -1.65
CCNA1P78396 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCNA1P78396 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNA1P78396 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNA1P78396 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCNA1P78396 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCNA1P78396 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.71□□□□□ -1.65
CCNA1P78396 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CCNA1P78396 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNA1P78396 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNA1P78396 Z82217.1-201ENST00000625157 8149 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNA1P78396 SNORA71.3-201ENST00000362582 128 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 RNA5SP22-201ENST00000365393 109 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 SNORA70.4-201ENST00000365509 134 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNA1P78396 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.71□□□□□ -1.66
CCNA1P78396 BTF3P9-201ENST00000418784 283 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AC009965.2-201ENST00000425328 970 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 RWDD4P2-201ENST00000426392 563 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 MTCO1P54-201ENST00000430139 712 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 RPL37P1-201ENST00000432310 284 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNA1P78396 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNA1P78396 RWDD4P1-201ENST00000488019 565 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 RN7SKP141-201ENST00000516167 338 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNA1P78396 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNA1P78396 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNA1P78396 MIR4512-201ENST00000583257 77 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AC110743.1-201ENST00000584870 478 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNA1P78396 AC068020.1-201ENST00000594215 661 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNA1P78396 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNA1P78396 AC004777.1-201ENST00000624317 287 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNA1P78396 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNA1P78396 AC012442.3-202ENST00000636742 206 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AC119674.1-212ENST00000641155 993 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNA1P78396 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNA1P78396 LINC01355-201ENST00000566551 5444 ntBASIC4.71□□□□□ -1.66
CCNA1P78396 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNA1P78396 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNA1P78396 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNA1P78396 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCNA1P78396 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
CCNA1P78396 SCN1A-220ENST00000641603 12506 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNA1P78396 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms