Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC019131.2-201ENST00000609071 870 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AC064801.1-201ENST00000612025 407 ntBASIC3.92□□□□□ -1.78
VSX2P58304 RNA5SP196-201ENST00000625967 102 ntBASIC3.92□□□□□ -1.78
VSX2P58304 OR5BE1P-202ENST00000641168 1176 ntBASIC3.92□□□□□ -1.78
VSX2P58304 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX2P58304 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
VSX2P58304 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.92□□□□□ -1.78
VSX2P58304 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VSX2P58304 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.91□□□□□ -1.78
VSX2P58304 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VSX2P58304 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.91□□□□□ -1.78
VSX2P58304 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
VSX2P58304 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VSX2P58304 RNU6-618P-201ENST00000363518 112 ntBASIC3.91□□□□□ -1.78
VSX2P58304 SNORD35B-201ENST00000363660 87 ntBASIC3.91□□□□□ -1.78
VSX2P58304 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.91□□□□□ -1.78
VSX2P58304 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.91□□□□□ -1.78
VSX2P58304 RNU6-628P-201ENST00000410675 107 ntBASIC3.91□□□□□ -1.78
VSX2P58304 TPT1P2-201ENST00000413105 503 ntBASIC3.91□□□□□ -1.78
VSX2P58304 RAC1P3-201ENST00000416129 580 ntBASIC3.91□□□□□ -1.78
VSX2P58304 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.91□□□□□ -1.78
VSX2P58304 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.91□□□□□ -1.78
VSX2P58304 AJ239321.1-201ENST00000424255 564 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 RPL12P46-201ENST00000436610 195 ntBASIC3.91□□□□□ -1.78
VSX2P58304 MTCYBP21-201ENST00000443300 1113 ntBASIC3.91□□□□□ -1.78
VSX2P58304 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 HSFY6P-201ENST00000445573 403 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AL162151.2-201ENST00000448875 158 ntBASIC3.91□□□□□ -1.78
VSX2P58304 IFNWP4-201ENST00000453148 294 ntBASIC3.91□□□□□ -1.78
VSX2P58304 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.91□□□□□ -1.78
VSX2P58304 RAD23BP3-201ENST00000454157 1152 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC020898.1-201ENST00000474167 787 ntBASIC3.91□□□□□ -1.78
VSX2P58304 MTND3P6-201ENST00000485242 339 ntBASIC3.91□□□□□ -1.78
VSX2P58304 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.91□□□□□ -1.78
VSX2P58304 AC067904.2-201ENST00000517322 1283 ntBASIC3.91□□□□□ -1.78
VSX2P58304 OR7E10P-201ENST00000526420 991 ntBASIC3.91□□□□□ -1.78
VSX2P58304 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 AC084824.1-201ENST00000550917 1005 ntBASIC3.91□□□□□ -1.78
VSX2P58304 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.91□□□□□ -1.78
VSX2P58304 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.91□□□□□ -1.78
VSX2P58304 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 HNRNPCP4-201ENST00000571636 900 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC025627.2-201ENST00000576220 160 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC012417.1-201ENST00000582307 1039 ntBASIC3.91□□□□□ -1.78
VSX2P58304 MIR5684-201ENST00000585074 65 ntBASIC3.91□□□□□ -1.78
VSX2P58304 BNIP3P7-201ENST00000605641 516 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC034236.3-201ENST00000605999 461 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC017076.1-201ENST00000607613 578 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AL031666.3-201ENST00000609320 1006 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC078899.5-201ENST00000612475 178 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AC004825.2-201ENST00000616634 455 ntBASIC3.91□□□□□ -1.78
VSX2P58304 MIR7151-201ENST00000617477 60 ntBASIC3.91□□□□□ -1.78
VSX2P58304 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.91□□□□□ -1.78
VSX2P58304 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VSX2P58304 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VSX2P58304 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 ERCC6-202ENST00000374127 1782 ntBASIC3.91□□□□□ -1.78
VSX2P58304 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VSX2P58304 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.91□□□□□ -1.78
VSX2P58304 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
VSX2P58304 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VSX2P58304 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
VSX2P58304 AL049555.1-201ENST00000562834 1933 ntBASIC3.9□□□□□ -1.78
VSX2P58304 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.9□□□□□ -1.78
VSX2P58304 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.9□□□□□ -1.79
VSX2P58304 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
VSX2P58304 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VSX2P58304 SNORA60-201ENST00000362396 134 ntBASIC3.9□□□□□ -1.79
VSX2P58304 RNU4-23P-201ENST00000362839 140 ntBASIC3.9□□□□□ -1.79
VSX2P58304 RNU6-1251P-201ENST00000364502 107 ntBASIC3.9□□□□□ -1.79
VSX2P58304 RNA5SP283-201ENST00000365604 119 ntBASIC3.9□□□□□ -1.79
VSX2P58304 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VSX2P58304 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VSX2P58304 AC240504.1-201ENST00000395709 845 ntBASIC3.9□□□□□ -1.79
VSX2P58304 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
VSX2P58304 AP000357.1-201ENST00000409926 1165 ntBASIC3.9□□□□□ -1.79
VSX2P58304 RNU6-564P-201ENST00000410983 104 ntBASIC3.9□□□□□ -1.79
VSX2P58304 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VSX2P58304 AL117339.2-201ENST00000430475 180 ntBASIC3.9□□□□□ -1.79
VSX2P58304 AL358472.1-201ENST00000431295 329 ntBASIC3.9□□□□□ -1.79
VSX2P58304 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.9□□□□□ -1.79
VSX2P58304 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.9□□□□□ -1.79
VSX2P58304 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.9□□□□□ -1.79
VSX2P58304 AL133477.1-201ENST00000457472 514 ntBASIC3.9□□□□□ -1.79
VSX2P58304 AL132838.2-201ENST00000492041 314 ntBASIC3.9□□□□□ -1.79
VSX2P58304 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.9□□□□□ -1.79
VSX2P58304 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.9□□□□□ -1.79
VSX2P58304 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.9□□□□□ -1.79
VSX2P58304 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.9□□□□□ -1.79
VSX2P58304 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.9□□□□□ -1.79
VSX2P58304 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms