Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NIPA2P2-201ENST00000496376 1083 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN12P56749 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN12P56749 KCTD9P2-201ENST00000512203 1013 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN12P56749 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN12P56749 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN12P56749 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN12P56749 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN12P56749 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN12P56749 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.48□□□□□ -1.85
CLDN12P56749 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.48□□□□□ -1.85
CLDN12P56749 AC063949.1-201ENST00000552900 865 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN12P56749 TVP23BP1-201ENST00000557500 617 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN12P56749 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN12P56749 AL109741.3-201ENST00000561748 592 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.48□□□□□ -1.85
CLDN12P56749 AP001180.3-201ENST00000582221 145 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 NF1P5-201ENST00000588287 448 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.48□□□□□ -1.85
CLDN12P56749 RPL12P25-202ENST00000598100 674 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 AL391834.1-201ENST00000609609 560 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 AC018445.2-201ENST00000622987 260 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 C2orf27A-204ENST00000623058 969 ntBASIC3.48□□□□□ -1.85
CLDN12P56749 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
CLDN12P56749 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CLDN12P56749 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN12P56749 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CLDN12P56749 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CLDN12P56749 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLDN12P56749 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.48□□□□□ -1.85
CLDN12P56749 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.48□□□□□ -1.85
CLDN12P56749 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN12P56749 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN12P56749 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
CLDN12P56749 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN12P56749 RNU1-18P-201ENST00000363062 164 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN12P56749 HMGN2P8-201ENST00000391458 268 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN12P56749 AC069213.2-201ENST00000420238 366 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 RPL7P53-201ENST00000421245 739 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN12P56749 BMS1P19-201ENST00000433925 393 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 RPS26P40-201ENST00000435209 294 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 VN1R54P-201ENST00000435210 1049 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AL627308.1-201ENST00000435693 821 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN12P56749 RN7SL93P-201ENST00000463035 293 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN12P56749 RPL35P6-201ENST00000490024 372 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC012170.1-201ENST00000495139 359 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC068305.1-201ENST00000497406 726 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN12P56749 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
CLDN12P56749 USP9YP5-201ENST00000511770 630 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC005798.1-201ENST00000513715 387 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC010476.1-201ENST00000519111 851 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN12P56749 OR5D15P-201ENST00000531671 942 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN12P56749 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN12P56749 AL034351.1-201ENST00000605288 668 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC090948.1-201ENST00000607464 549 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN12P56749 MIR7155-201ENST00000615925 56 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AC091953.3-201ENST00000623220 236 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN12P56749 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLDN12P56749 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CLDN12P56749 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CLDN12P56749 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN12P56749 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN12P56749 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
CLDN12P56749 MFSD8-216ENST00000641147 4009 ntBASIC3.47□□□□□ -1.85
CLDN12P56749 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN12P56749 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CLDN12P56749 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN12P56749 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
CLDN12P56749 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN12P56749 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN12P56749 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN12P56749 RNU6-618P-201ENST00000363518 112 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN12P56749 AMZ2P2-201ENST00000406819 1057 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 MIR1251-201ENST00000408552 70 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 RN7SKP278-201ENST00000410504 342 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN12P56749 AC007064.3-201ENST00000422608 359 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN12P56749 RPS3AP54-201ENST00000435535 734 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN12P56749 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN12P56749 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN12P56749 RPL5P32-201ENST00000454085 879 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 SNORD108-201ENST00000459332 71 ntBASIC3.46□□□□□ -1.86
CLDN12P56749 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN12P56749 RPL7P24-201ENST00000493052 752 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms