Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL591848.1-201ENST00000413092 322 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 LIPT1P1-201ENST00000415870 1186 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 BX510359.2-201ENST00000417920 305 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC4P56524 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC4P56524 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.9□□□□□ -1.63
HDAC4P56524 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC4P56524 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.9□□□□□ -1.63
HDAC4P56524 AC092170.1-201ENST00000440211 356 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.9□□□□□ -1.63
HDAC4P56524 RPL36AP15-201ENST00000444514 266 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 OR51B8P-201ENST00000449892 769 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC4P56524 AC108463.1-201ENST00000450258 347 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC239809.1-201ENST00000450470 217 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 TPMTP4-201ENST00000450749 678 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC133473.1-201ENST00000455173 299 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 SCARNA10-201ENST00000459255 330 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 RPL23AP37-201ENST00000479658 549 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC4P56524 AC093720.1-201ENST00000505681 714 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC114322.1-201ENST00000506771 926 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 OR7H2P-201ENST00000513483 306 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC026407.1-201ENST00000518369 204 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC4P56524 AL110118.1-201ENST00000553543 400 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.9□□□□□ -1.63
HDAC4P56524 ZNF971P-201ENST00000562068 1249 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC4P56524 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC4P56524 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HDAC4P56524 AC125494.3-201ENST00000602759 455 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 Z82195.1-201ENST00000604558 398 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 IMMP1LP1-201ENST00000605170 488 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AL365400.2-201ENST00000605604 902 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 RNU4-5P-201ENST00000607255 135 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC4P56524 AC024595.1-201ENST00000623088 387 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC104985.3-201ENST00000623479 597 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 AC006963.1-201ENST00000624003 1052 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HDAC4P56524 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC4P56524 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HDAC4P56524 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HDAC4P56524 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.9□□□□□ -1.63
HDAC4P56524 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 AL133268.1-201ENST00000405676 1401 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 SDAD1P1-202ENST00000524156 2051 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 AL118496.1-201ENST00000440201 1812 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 ENSAP3-201ENST00000312710 333 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 RNA5SP502-201ENST00000362694 119 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDAC4P56524 SNORD65C-201ENST00000390962 71 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC4P56524 RPS4XP9-201ENST00000405151 780 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AL080315.1-201ENST00000406055 466 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC019050.1-201ENST00000418508 492 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC4P56524 MTCYBP15-201ENST00000433123 1127 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC4P56524 OR10R1P-201ENST00000441524 1141 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AL031313.1-201ENST00000448435 256 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC006511.1-201ENST00000470614 315 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 MTND6P6-201ENST00000478031 263 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC083829.1-201ENST00000503756 657 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC113420.1-201ENST00000507903 571 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 PRELID3BP5-201ENST00000508612 460 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 RNA5SP497-201ENST00000516081 97 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 RNU2-30P-201ENST00000516209 141 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 RN7SKP265-201ENST00000516448 223 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDAC4P56524 OR8I1P-201ENST00000529291 931 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.89□□□□□ -1.63
HDAC4P56524 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 AL132857.1-201ENST00000555180 708 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 HMGB3P26-201ENST00000560051 582 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC095057.3-201ENST00000567102 1157 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC091042.1-201ENST00000579213 173 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC098935.2-201ENST00000604222 466 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms