Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH6P55285 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 RN7SKP44-201ENST00000363602 316 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 RNU11-4P-201ENST00000391149 133 ntBASIC4.22□□□□□ -1.73
CDH6P55285 RPL26P37-201ENST00000411983 438 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC004552.1-201ENST00000419089 348 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC073464.3-201ENST00000422564 712 ntBASIC4.22□□□□□ -1.73
CDH6P55285 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH6P55285 AL353898.1-201ENST00000444055 238 ntBASIC4.22□□□□□ -1.73
CDH6P55285 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH6P55285 AL157827.1-201ENST00000447622 132 ntBASIC4.22□□□□□ -1.73
CDH6P55285 RNU7-27P-201ENST00000459281 62 ntBASIC4.22□□□□□ -1.73
CDH6P55285 RPL38P1-201ENST00000460914 211 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC010618.1-201ENST00000469924 477 ntBASIC4.22□□□□□ -1.73
CDH6P55285 RPS26P3-201ENST00000470205 348 ntBASIC4.22□□□□□ -1.73
CDH6P55285 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH6P55285 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CDH6P55285 MTND6P6-201ENST00000478031 263 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC090543.2-201ENST00000483963 348 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC004057.1-201ENST00000485827 348 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH6P55285 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH6P55285 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH6P55285 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH6P55285 OR51K1P-201ENST00000510214 950 ntBASIC4.22□□□□□ -1.73
CDH6P55285 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH6P55285 SNORA70.17-201ENST00000516449 133 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH6P55285 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH6P55285 AC084757.1-201ENST00000559987 490 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC022884.3-201ENST00000579571 248 ntBASIC4.22□□□□□ -1.73
CDH6P55285 SS18L2P2-201ENST00000583960 235 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC011477.5-201ENST00000586571 259 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC119501.1-201ENST00000603646 475 ntBASIC4.22□□□□□ -1.73
CDH6P55285 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH6P55285 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 OR52H1-202ENST00000641796 1061 ntBASIC4.22□□□□□ -1.73
CDH6P55285 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CDH6P55285 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 AL133412.1-201ENST00000380194 2992 ntBASIC4.22□□□□□ -1.73
CDH6P55285 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH6P55285 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.21□□□□□ -1.73
CDH6P55285 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH6P55285 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH6P55285 AC093311.1-201ENST00000506586 2021 ntBASIC4.21□□□□□ -1.74
CDH6P55285 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH6P55285 FAM3C2-201ENST00000312214 681 ntBASIC4.21□□□□□ -1.74
CDH6P55285 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH6P55285 OR11H4-201ENST00000315409 1082 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC126755.2-208ENST00000327792 462 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC138969.1-213ENST00000331436 462 ntBASIC4.21□□□□□ -1.74
CDH6P55285 SNORA60-201ENST00000362396 134 ntBASIC4.21□□□□□ -1.74
CDH6P55285 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH6P55285 MIR3074-201ENST00000384885 81 ntBASIC4.21□□□□□ -1.74
CDH6P55285 RPS27AP11-201ENST00000402798 447 ntBASIC4.21□□□□□ -1.74
CDH6P55285 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH6P55285 AMZ2P2-201ENST00000406819 1057 ntBASIC4.21□□□□□ -1.74
CDH6P55285 RN7SKP33-201ENST00000410942 340 ntBASIC4.21□□□□□ -1.74
CDH6P55285 JKAMPP1-201ENST00000413804 919 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH6P55285 AC108032.1-201ENST00000416706 207 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH6P55285 AL355994.1-201ENST00000424379 260 ntBASIC4.21□□□□□ -1.74
CDH6P55285 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH6P55285 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.21□□□□□ -1.74
CDH6P55285 VN1R25P-201ENST00000443385 738 ntBASIC4.21□□□□□ -1.74
CDH6P55285 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.21□□□□□ -1.74
CDH6P55285 VN1R40P-201ENST00000455196 941 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC026979.1-201ENST00000492525 396 ntBASIC4.21□□□□□ -1.74
CDH6P55285 RPL31P61-201ENST00000496160 376 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC091917.2-201ENST00000505002 744 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH6P55285 HNRNPKP5-201ENST00000515300 253 ntBASIC4.21□□□□□ -1.74
CDH6P55285 MRPL49P2-201ENST00000521066 465 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH6P55285 CYCSP29-201ENST00000533731 318 ntBASIC4.21□□□□□ -1.74
CDH6P55285 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH6P55285 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH6P55285 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH6P55285 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH6P55285 AC007423.1-201ENST00000605009 627 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AL391834.1-201ENST00000609609 560 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AP000255.1-201ENST00000610276 676 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC006338.2-201ENST00000616864 791 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC009318.3-201ENST00000616916 503 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC016957.2-201ENST00000616998 848 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AC233309.1-201ENST00000619522 751 ntBASIC4.21□□□□□ -1.74
CDH6P55285 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH6P55285 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH6P55285 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH6P55285 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH6P55285 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDH6P55285 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH6P55285 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH6P55285 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CDH6P55285 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH6P55285 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms