Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MTCO1P12-201ENST00000414273 1543 ntBASIC4.6□□□□□ -1.67
NUP98P52948 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP98P52948 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP98P52948 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP98P52948 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP98P52948 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP98P52948 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NUP98P52948 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP98P52948 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP98P52948 MIR513A2-201ENST00000385249 127 ntBASIC4.59□□□□□ -1.67
NUP98P52948 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP98P52948 Z75741.1-201ENST00000446793 314 ntBASIC4.59□□□□□ -1.67
NUP98P52948 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP98P52948 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
NUP98P52948 AC026784.1-201ENST00000507986 352 ntBASIC4.59□□□□□ -1.67
NUP98P52948 RN7SKP83-201ENST00000516512 178 ntBASIC4.59□□□□□ -1.67
NUP98P52948 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP98P52948 MIR3200-201ENST00000580767 85 ntBASIC4.59□□□□□ -1.67
NUP98P52948 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP98P52948 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP98P52948 AC015722.2-201ENST00000622210 551 ntBASIC4.59□□□□□ -1.67
NUP98P52948 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP98P52948 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP98P52948 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP98P52948 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NUP98P52948 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP98P52948 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
NUP98P52948 MTND5P1-201ENST00000445440 1375 ntBASIC4.59□□□□□ -1.68
NUP98P52948 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NUP98P52948 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP98P52948 HSFY4P-201ENST00000415994 1181 ntBASIC4.58□□□□□ -1.68
NUP98P52948 AC098824.1-201ENST00000453565 980 ntBASIC4.58□□□□□ -1.68
NUP98P52948 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP98P52948 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP98P52948 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP98P52948 BNIP3P41-202ENST00000616656 861 ntBASIC4.58□□□□□ -1.68
NUP98P52948 OR5AC4P-202ENST00000642086 985 ntBASIC4.58□□□□□ -1.68
NUP98P52948 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP98P52948 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NUP98P52948 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP98P52948 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
NUP98P52948 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP98P52948 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
NUP98P52948 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP98P52948 RNVU1-14-201ENST00000384770 164 ntBASIC4.58□□□□□ -1.68
NUP98P52948 DPY19L1P2-201ENST00000426647 915 ntBASIC4.58□□□□□ -1.68
NUP98P52948 AC017083.1-201ENST00000428093 483 ntBASIC4.58□□□□□ -1.68
NUP98P52948 CYCSP35-201ENST00000451978 304 ntBASIC4.58□□□□□ -1.68
NUP98P52948 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP98P52948 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP98P52948 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP98P52948 AC093663.1-201ENST00000497190 394 ntBASIC4.58□□□□□ -1.68
NUP98P52948 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP98P52948 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP98P52948 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP98P52948 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP98P52948 AC008638.3-201ENST00000603341 463 ntBASIC4.58□□□□□ -1.68
NUP98P52948 AL354976.1-201ENST00000613843 387 ntBASIC4.58□□□□□ -1.68
NUP98P52948 U4.6-201ENST00000621618 127 ntBASIC4.58□□□□□ -1.68
NUP98P52948 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP98P52948 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP98P52948 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP98P52948 AC032011.1-201ENST00000611703 1549 ntBASIC4.57□□□□□ -1.68
NUP98P52948 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUP98P52948 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUP98P52948 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP98P52948 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP98P52948 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP98P52948 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUP98P52948 RHOT1P2-201ENST00000366423 333 ntBASIC4.57□□□□□ -1.68
NUP98P52948 RN7SKP199-201ENST00000410325 305 ntBASIC4.57□□□□□ -1.68
NUP98P52948 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP98P52948 AC073063.1-201ENST00000434352 607 ntBASIC4.57□□□□□ -1.68
NUP98P52948 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP98P52948 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP98P52948 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP98P52948 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP98P52948 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP98P52948 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP98P52948 LINC01109-201ENST00000603837 3081 ntBASIC4.57□□□□□ -1.68
NUP98P52948 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP98P52948 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP98P52948 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
NUP98P52948 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP98P52948 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP98P52948 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP98P52948 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP98P52948 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP98P52948 AC127537.2-201ENST00000439258 465 ntBASIC4.56□□□□□ -1.68
NUP98P52948 AC025518.1-201ENST00000479856 347 ntBASIC4.56□□□□□ -1.68
NUP98P52948 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP98P52948 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP98P52948 MIR5186-201ENST00000577504 120 ntBASIC4.56□□□□□ -1.68
NUP98P52948 AC012493.2-201ENST00000595083 291 ntBASIC4.56□□□□□ -1.68
NUP98P52948 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.56□□□□□ -1.68
NUP98P52948 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP98P52948 AC128687.2-201ENST00000609657 566 ntBASIC4.56□□□□□ -1.68
NUP98P52948 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NUP98P52948 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP98P52948 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms