Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL158196.1-201ENST00000616786 434 ntBASIC4.49□□□□□ -1.69
HNF4AP41235 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.49□□□□□ -1.69
HNF4AP41235 FAM157B-203ENST00000639350 358 ntBASIC4.49□□□□□ -1.69
HNF4AP41235 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HNF4AP41235 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HNF4AP41235 AC025031.4-201ENST00000621248 3271 ntBASIC4.49□□□□□ -1.69
HNF4AP41235 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HNF4AP41235 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HNF4AP41235 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HNF4AP41235 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.48□□□□□ -1.69
HNF4AP41235 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.48□□□□□ -1.69
HNF4AP41235 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.48□□□□□ -1.69
HNF4AP41235 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HNF4AP41235 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HNF4AP41235 RNU6-356P-201ENST00000384140 107 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 SNORD96B-201ENST00000386148 79 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HNF4AP41235 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 RPL23AP48-201ENST00000406913 488 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC140479.3-201ENST00000418944 1126 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 RPS15AP40-201ENST00000419621 391 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 FTH1P6-201ENST00000430768 320 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.48□□□□□ -1.69
HNF4AP41235 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.48□□□□□ -1.69
HNF4AP41235 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.48□□□□□ -1.69
HNF4AP41235 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC073522.1-201ENST00000483312 377 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 RPS4XP18-201ENST00000495480 763 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.48□□□□□ -1.69
HNF4AP41235 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 RPL21P7-201ENST00000557463 483 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC079148.1-201ENST00000565944 819 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC209154.1-201ENST00000582156 337 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC015911.5-201ENST00000587076 451 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC012254.4-201ENST00000588843 273 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC098935.2-201ENST00000604222 466 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 RNA5SP108-201ENST00000605921 117 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC120053.1-201ENST00000607706 736 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AL391834.2-201ENST00000609982 546 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.48□□□□□ -1.69
HNF4AP41235 AC009237.17-201ENST00000618111 748 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC073569.3-201ENST00000619055 682 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC140113.4-201ENST00000622087 222 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 AC092608.3-201ENST00000625017 386 ntBASIC4.48□□□□□ -1.69
HNF4AP41235 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
HNF4AP41235 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HNF4AP41235 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 AC135352.1-201ENST00000506173 1418 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.47□□□□□ -1.69
HNF4AP41235 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HNF4AP41235 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.47□□□□□ -1.69
HNF4AP41235 GCNT6-201ENST00000379591 934 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HNF4AP41235 RNU2-21P-201ENST00000410368 188 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.47□□□□□ -1.69
HNF4AP41235 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 AL121882.1-201ENST00000422893 417 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 EIF2S2P2-201ENST00000447161 982 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC108463.1-201ENST00000450258 347 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.47□□□□□ -1.69
HNF4AP41235 RN7SL205P-201ENST00000490174 284 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC108022.1-201ENST00000493466 478 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 RPL36AP41-201ENST00000493820 306 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.47□□□□□ -1.69
HNF4AP41235 AC008885.2-201ENST00000509506 930 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 AC104229.1-201ENST00000561364 255 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.47□□□□□ -1.69
HNF4AP41235 MIR4270-201ENST00000581799 70 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 MIR4443-201ENST00000585052 53 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.47□□□□□ -1.69
HNF4AP41235 AC103792.1-201ENST00000603591 919 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC008966.2-201ENST00000606157 453 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AL163051.2-201ENST00000618976 735 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 AC004232.3-201ENST00000622977 525 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 AC004943.3-201ENST00000624116 600 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 MIR4496-201ENST00000635896 61 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms