Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX3P41225 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
SOX3P41225 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.15□□□□□ -1.74
SOX3P41225 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX3P41225 ZNF849P-201ENST00000594711 1566 ntBASIC4.15□□□□□ -1.74
SOX3P41225 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SOX3P41225 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
SOX3P41225 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.15□□□□□ -1.74
SOX3P41225 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX3P41225 CPHL1P-201ENST00000461341 3407 ntBASIC4.15□□□□□ -1.74
SOX3P41225 AC027228.2-201ENST00000567141 2154 ntBASIC4.15□□□□□ -1.75
SOX3P41225 RNA5SP52-201ENST00000362448 134 ntBASIC4.15□□□□□ -1.75
SOX3P41225 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX3P41225 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX3P41225 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SOX3P41225 RPL23AP59-201ENST00000399415 461 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AL121834.1-202ENST00000404494 277 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 MTND4P11-201ENST00000417020 1058 ntBASIC4.15□□□□□ -1.75
SOX3P41225 RPL12P34-201ENST00000424532 479 ntBASIC4.15□□□□□ -1.75
SOX3P41225 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 C4BPAP2-201ENST00000428434 478 ntBASIC4.15□□□□□ -1.75
SOX3P41225 MTCO3P21-201ENST00000430791 643 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX3P41225 FABP5P3-201ENST00000437960 408 ntBASIC4.15□□□□□ -1.75
SOX3P41225 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX3P41225 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SOX3P41225 RPL23AP43-201ENST00000446445 471 ntBASIC4.15□□□□□ -1.75
SOX3P41225 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 RPL7AP52-201ENST00000458096 790 ntBASIC4.15□□□□□ -1.75
SOX3P41225 PRELID3BP6-201ENST00000503839 571 ntBASIC4.15□□□□□ -1.75
SOX3P41225 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.15□□□□□ -1.75
SOX3P41225 PPBPP1-201ENST00000510807 373 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC015795.1-201ENST00000513669 327 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX3P41225 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 AC010376.1-201ENST00000522101 334 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 AP000827.1-201ENST00000527814 258 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC118942.1-201ENST00000529674 1035 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SOX3P41225 AC025260.1-201ENST00000548858 430 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX3P41225 AC068831.4-201ENST00000556118 109 ntBASIC4.15□□□□□ -1.75
SOX3P41225 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SOX3P41225 NPM1P47-201ENST00000560843 856 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC008759.1-201ENST00000589783 983 ntBASIC4.15□□□□□ -1.75
SOX3P41225 HMGB2P1-201ENST00000591146 634 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC005191.1-201ENST00000603950 358 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC099785.1-201ENST00000605697 437 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AC018754.1-201ENST00000607486 925 ntBASIC4.15□□□□□ -1.75
SOX3P41225 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX3P41225 MIR6758-201ENST00000620653 63 ntBASIC4.15□□□□□ -1.75
SOX3P41225 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX3P41225 OR2L1P-202ENST00000641567 1023 ntBASIC4.15□□□□□ -1.75
SOX3P41225 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SOX3P41225 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SOX3P41225 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX3P41225 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SOX3P41225 LINC00622-201ENST00000562811 1570 ntBASIC4.14□□□□□ -1.75
SOX3P41225 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX3P41225 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX3P41225 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.14□□□□□ -1.75
SOX3P41225 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX3P41225 KPNA2P2-201ENST00000419546 1489 ntBASIC4.14□□□□□ -1.75
SOX3P41225 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX3P41225 AC067945.1-201ENST00000342609 618 ntBASIC4.14□□□□□ -1.75
SOX3P41225 SNORA62.2-201ENST00000364672 152 ntBASIC4.14□□□□□ -1.75
SOX3P41225 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 RNU6-298P-201ENST00000390888 96 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AL160275.2-201ENST00000412010 394 ntBASIC4.14□□□□□ -1.75
SOX3P41225 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX3P41225 SNRPFP1-201ENST00000414761 252 ntBASIC4.14□□□□□ -1.75
SOX3P41225 TMSB10P2-201ENST00000416049 131 ntBASIC4.14□□□□□ -1.75
SOX3P41225 LINC01881-201ENST00000416103 412 ntBASIC4.14□□□□□ -1.75
SOX3P41225 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX3P41225 RAD23BP1-201ENST00000421404 1227 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AL356387.2-201ENST00000422272 243 ntBASIC4.14□□□□□ -1.75
SOX3P41225 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX3P41225 NIPA2P1-201ENST00000426223 976 ntBASIC4.14□□□□□ -1.75
SOX3P41225 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX3P41225 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 AC000041.1-201ENST00000439655 175 ntBASIC4.14□□□□□ -1.75
SOX3P41225 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX3P41225 EIF2S2P2-201ENST00000447161 982 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC022431.1-201ENST00000450941 438 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AL035407.2-201ENST00000454090 378 ntBASIC4.14□□□□□ -1.75
SOX3P41225 RPL23AP24-201ENST00000458203 385 ntBASIC4.14□□□□□ -1.75
SOX3P41225 snoU109.3-201ENST00000459477 145 ntBASIC4.14□□□□□ -1.75
SOX3P41225 RPL5P30-201ENST00000465511 891 ntBASIC4.14□□□□□ -1.75
SOX3P41225 RN7SL860P-201ENST00000473738 223 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.14□□□□□ -1.75
SOX3P41225 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 RNA5SP154-201ENST00000516193 111 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms