Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC012497.1-201ENST00000429392 575 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.49□□□□□ -1.69
CHRNA3P32297 ZNF965P-201ENST00000432501 817 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA3P32297 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA3P32297 RPL7P31-201ENST00000450192 724 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 RPL7P32-201ENST00000457119 744 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 RN7SL303P-201ENST00000469773 251 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AC006517.1-201ENST00000480485 328 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA3P32297 AC104164.2-201ENST00000496953 495 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AC113430.1-201ENST00000506872 718 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AC106806.2-201ENST00000509365 500 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 RN7SKP122-201ENST00000515923 296 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AC090819.1-201ENST00000523800 1111 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA3P32297 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA3P32297 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA3P32297 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.49□□□□□ -1.69
CHRNA3P32297 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA3P32297 PARP1P2-201ENST00000556806 195 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AC027176.2-201ENST00000559166 746 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 KPNA2P3-201ENST00000584190 848 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 NF1P5-201ENST00000588287 448 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AC079587.1-201ENST00000603846 277 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA3P32297 AC005962.2-201ENST00000611427 652 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 AC104307.1-201ENST00000616142 196 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 LINC00901.1-201ENST00000617252 152 ntBASIC4.49□□□□□ -1.69
CHRNA3P32297 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA3P32297 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA3P32297 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CHRNA3P32297 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC016588.2-201ENST00000632484 3021 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CHRNA3P32297 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 AL589826.1-201ENST00000340697 249 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 SNORA70.2-201ENST00000364506 135 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AL049693.1-201ENST00000402760 611 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AC010385.1-201ENST00000412374 256 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC011933.1-201ENST00000413334 321 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 JKAMPP1-201ENST00000413804 919 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 LINC01881-201ENST00000416103 412 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 EIF1P3-201ENST00000423841 334 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 GSTA7P-201ENST00000438425 448 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AC116533.1-201ENST00000459748 321 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 RPL35AP15-201ENST00000468042 339 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AC109327.1-201ENST00000471666 403 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 SYT14P1-201ENST00000481459 721 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 OR52A4P-202ENST00000481634 799 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC023050.1-201ENST00000498198 304 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AC111193.1-201ENST00000504097 155 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AC139783.2-201ENST00000504847 1145 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA3P32297 RN7SKP141-201ENST00000516167 338 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 VTA1P2-201ENST00000520205 911 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC106785.3-201ENST00000564064 847 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC023575.1-201ENST00000580510 358 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA3P32297 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 AC114781.5-201ENST00000615297 108 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 AC025016.1-201ENST00000616746 682 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 MIR7702-201ENST00000621931 59 ntBASIC4.48□□□□□ -1.69
CHRNA3P32297 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA3P32297 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA3P32297 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA3P32297 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA3P32297 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHRNA3P32297 MTND4P31-201ENST00000425607 1343 ntBASIC4.47□□□□□ -1.69
CHRNA3P32297 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA3P32297 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA3P32297 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHRNA3P32297 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHRNA3P32297 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHRNA3P32297 AL353743.4-201ENST00000422653 1547 ntBASIC4.47□□□□□ -1.69
CHRNA3P32297 AC092162.3-201ENST00000624511 1624 ntBASIC4.47□□□□□ -1.69
CHRNA3P32297 USP9YP4-201ENST00000424401 1745 ntBASIC4.47□□□□□ -1.69
CHRNA3P32297 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA3P32297 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHRNA3P32297 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA3P32297 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms