Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIR6864-201ENST00000617935 70 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC13P31276 AC025031.4-201ENST00000621248 3271 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC13P31276 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC13P31276 AC083899.2-201ENST00000423285 1376 ntBASIC4.78□□□□□ -1.64
HOXC13P31276 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC13P31276 Z95331.1-201ENST00000623075 23112 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 XIAPP3-201ENST00000312918 795 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 OR56B2P-201ENST00000317102 954 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 SNORA57.1-201ENST00000391227 145 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 OR6C69P-201ENST00000394268 893 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 Z98745.1-201ENST00000402553 494 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AL359643.1-201ENST00000404109 423 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 MIR1271-201ENST00000408537 86 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC13P31276 RAD23BP1-201ENST00000421404 1227 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 Z74021.1-201ENST00000423610 407 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 RPL21P43-201ENST00000425440 472 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXC13P31276 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC13P31276 RPL7P32-201ENST00000457119 744 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC13P31276 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC108751.2-201ENST00000469993 231 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 AP000926.1-201ENST00000479573 241 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC13P31276 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 AC008628.1-201ENST00000508663 265 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC106806.2-201ENST00000509365 500 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC027338.1-201ENST00000514840 825 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC13P31276 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC13P31276 AC034105.4-201ENST00000568304 277 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC090079.2-201ENST00000575289 768 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC069061.3-201ENST00000582254 823 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC092574.1-201ENST00000609771 420 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 U3.53-201ENST00000628922 216 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 AC083865.1-201ENST00000636634 831 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC13P31276 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 ZNF137P-201ENST00000456718 1920 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC13P31276 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC13P31276 AC006971.1-201ENST00000407916 4486 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HOXC13P31276 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC13P31276 A2MP1-204ENST00000566278 4130 ntBASIC4.77□□□□□ -1.65
HOXC13P31276 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC13P31276 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC13P31276 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC13P31276 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC13P31276 MIR23B-201ENST00000384832 97 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 SDHCP2-201ENST00000398565 501 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC13P31276 VTA1P1-201ENST00000414044 866 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC13P31276 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC13P31276 RPS27AP12-201ENST00000429552 465 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC13P31276 OR4C10P-201ENST00000434991 931 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC13P31276 RPS26P2-201ENST00000440331 348 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 RNFT1P2-201ENST00000443064 757 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC13P31276 ISCUP1-201ENST00000454451 448 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXC13P31276 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC018797.3-201ENST00000513388 1241 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 MTCO1P35-201ENST00000515270 228 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 OR5AK3P-201ENST00000527486 1297 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AP003049.1-201ENST00000529418 457 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC13P31276 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC13P31276 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC13P31276 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC13P31276 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC13P31276 VN1R85P-201ENST00000601587 426 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms