Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 VN1R84P-201ENST00000593697 235 ntBASIC5.24□□□□□ -1.57
TM4SF1P30408 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.24□□□□□ -1.57
TM4SF1P30408 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF1P30408 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF1P30408 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.24□□□□□ -1.57
TM4SF1P30408 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
TM4SF1P30408 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.24□□□□□ -1.57
TM4SF1P30408 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
TM4SF1P30408 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF1P30408 MTCO1P4-201ENST00000520516 1409 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 MAPK10-372ENST00000641954 3413 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.23□□□□□ -1.57
TM4SF1P30408 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TM4SF1P30408 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TM4SF1P30408 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TM4SF1P30408 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TM4SF1P30408 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.23□□□□□ -1.57
TM4SF1P30408 PNRC2P1-201ENST00000423940 420 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 MTCO3P21-201ENST00000430791 643 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 RPS4XP15-201ENST00000489210 795 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 AC104629.1-201ENST00000494226 508 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.23□□□□□ -1.57
TM4SF1P30408 AC112206.4-201ENST00000515142 405 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 AC138832.1-201ENST00000522871 556 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.23□□□□□ -1.57
TM4SF1P30408 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.23□□□□□ -1.57
TM4SF1P30408 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.23□□□□□ -1.57
TM4SF1P30408 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.23□□□□□ -1.57
TM4SF1P30408 AC106785.3-201ENST00000564064 847 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 AC112503.2-201ENST00000609005 552 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TM4SF1P30408 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 uc_338.9-201ENST00000617424 182 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TM4SF1P30408 AL138960.2-201ENST00000625145 535 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
TM4SF1P30408 AC096656.1-201ENST00000623826 1364 ntBASIC5.23□□□□□ -1.57
TM4SF1P30408 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TM4SF1P30408 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
TM4SF1P30408 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TM4SF1P30408 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TM4SF1P30408 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TM4SF1P30408 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.22□□□□□ -1.57
TM4SF1P30408 AC092079.1-201ENST00000558620 1985 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TM4SF1P30408 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 SNORA63.3-201ENST00000362682 132 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 RNU6-304P-201ENST00000364855 107 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 MIR7-3-201ENST00000384898 110 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 SNORD66.1-201ENST00000391230 76 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 RNU4-27P-201ENST00000410889 139 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.22□□□□□ -1.57
TM4SF1P30408 LINC01347-201ENST00000417964 355 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 MTCO3P4-201ENST00000419236 787 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 TBCAP1-201ENST00000436520 327 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AL353093.1-201ENST00000441292 436 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.22□□□□□ -1.57
TM4SF1P30408 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 AC104164.2-201ENST00000496953 495 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 RNU6-334P-201ENST00000517072 102 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.22□□□□□ -1.57
TM4SF1P30408 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.22□□□□□ -1.57
TM4SF1P30408 NPM1P47-201ENST00000560843 856 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AC120057.2-201ENST00000571520 271 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.22□□□□□ -1.57
TM4SF1P30408 MIR8069-1-201ENST00000616627 86 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AL031658.2-201ENST00000616850 651 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 MIR8069-2-201ENST00000621412 86 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AP001005.3-201ENST00000622049 129 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AC015908.5-201ENST00000623289 343 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 AP002967.1-201ENST00000624203 539 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.22□□□□□ -1.57
TM4SF1P30408 BX005019.1-201ENST00000561881 1810 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TM4SF1P30408 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 HSPD1P14-201ENST00000432666 1618 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.22□□□□□ -1.57
TM4SF1P30408 GTF2H2B-203ENST00000508065 1432 ntBASIC5.22□□□□□ -1.57
TM4SF1P30408 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF1P30408 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TM4SF1P30408 HSPD1P11-201ENST00000508643 1702 ntBASIC5.21□□□□□ -1.58
TM4SF1P30408 AC116667.1-201ENST00000604855 2072 ntBASIC5.21□□□□□ -1.58
TM4SF1P30408 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF1P30408 METTL21EP-201ENST00000298105 713 ntBASIC5.21□□□□□ -1.58
TM4SF1P30408 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF1P30408 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF1P30408 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.21□□□□□ -1.58
TM4SF1P30408 RPL23AP12-201ENST00000467573 473 ntBASIC5.21□□□□□ -1.58
TM4SF1P30408 RPL21P6-201ENST00000479171 504 ntBASIC5.21□□□□□ -1.58
TM4SF1P30408 RPS29P19-201ENST00000479709 171 ntBASIC5.21□□□□□ -1.58
TM4SF1P30408 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF1P30408 HMGN1P15-201ENST00000513870 295 ntBASIC5.21□□□□□ -1.58
TM4SF1P30408 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF1P30408 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms