Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAB5AP20339 THAP12P4-201ENST00000528321 2266 ntBASIC3.28□□□□□ -1.88
RAB5AP20339 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.28□□□□□ -1.88
RAB5AP20339 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
RAB5AP20339 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAB5AP20339 IPO8P1-201ENST00000455509 3109 ntBASIC3.28□□□□□ -1.88
RAB5AP20339 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.89
RAB5AP20339 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
RAB5AP20339 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB5AP20339 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 LINC00622-201ENST00000562811 1570 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB5AP20339 MIR184-201ENST00000384962 84 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 TAF9BP2-201ENST00000400856 499 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 DNAJC19P6-201ENST00000401853 280 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 MTCO3P31-201ENST00000405526 789 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 DUTP5-201ENST00000406790 469 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 AL591848.1-201ENST00000413092 322 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 RPS15AP40-201ENST00000419621 391 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 MTND4P24-201ENST00000424002 397 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 FAR2P4-202ENST00000425399 584 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 MTND4LP14-201ENST00000429447 288 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB5AP20339 AC069540.1-201ENST00000446320 988 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AL500522.2-201ENST00000448562 343 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC092647.2-201ENST00000452998 253 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 HMGB3P30-201ENST00000457863 606 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC104689.1-201ENST00000473356 768 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC079841.1-201ENST00000481228 950 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 AC004069.2-201ENST00000505438 1114 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 SNX5P1-201ENST00000505757 1041 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB5AP20339 AC026784.1-201ENST00000507986 352 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB5AP20339 PTGES3P3-201ENST00000511479 482 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 NDUFB4P9-201ENST00000511646 388 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB5AP20339 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB5AP20339 RN7SKP277-201ENST00000516895 283 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 IGKV2-23-201ENST00000518729 323 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB5AP20339 OR5AK3P-201ENST00000527486 1297 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 MTND2P26-201ENST00000528255 1029 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB5AP20339 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.27□□□□□ -1.89
RAB5AP20339 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB5AP20339 AC016180.1-201ENST00000567945 403 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC007599.1-201ENST00000568688 1174 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.27□□□□□ -1.89
RAB5AP20339 AC022726.1-201ENST00000587475 207 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.27□□□□□ -1.89
RAB5AP20339 AC015849.2-201ENST00000605738 409 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB5AP20339 RMST_8.1-201ENST00000610287 165 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC007497.1-201ENST00000610421 561 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AL162233.1-201ENST00000620014 944 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AC004808.2-201ENST00000627965 773 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB5AP20339 AC136428.4-201ENST00000634254 1155 ntBASIC3.27□□□□□ -1.89
RAB5AP20339 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB5AP20339 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.27□□□□□ -1.89
RAB5AP20339 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
RAB5AP20339 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAB5AP20339 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAB5AP20339 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RAB5AP20339 RAD17P1-201ENST00000418130 2042 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAB5AP20339 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAB5AP20339 ZNF90P1-201ENST00000480493 1951 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.26□□□□□ -1.89
RAB5AP20339 RAD1P1-201ENST00000231383 813 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 OR4K17-201ENST00000315543 1032 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 RNU6-328P-201ENST00000390887 106 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 HMGB1P10-201ENST00000395823 563 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RAB5AP20339 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.26□□□□□ -1.89
RAB5AP20339 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.26□□□□□ -1.89
RAB5AP20339 AP002530.1-201ENST00000405705 684 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 RNU2-17P-201ENST00000410290 190 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RAB5AP20339 GTF2IP5-201ENST00000414608 731 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 NUP35P2-201ENST00000416748 943 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 OR4F13P-201ENST00000428478 931 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 AC092809.1-201ENST00000441469 474 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 VN1R25P-201ENST00000443385 738 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 HMGB1P48-201ENST00000446155 598 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 HMGN2P21-201ENST00000447764 270 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 RPL31P15-201ENST00000449770 338 ntBASIC3.26□□□□□ -1.89
RAB5AP20339 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms