Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.49□□□□□ -1.69
KRT3P12035 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.49□□□□□ -1.69
KRT3P12035 CYP4A43P-201ENST00000568156 121 ntBASIC4.49□□□□□ -1.69
KRT3P12035 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.49□□□□□ -1.69
KRT3P12035 AL356218.2-201ENST00000605264 187 ntBASIC4.49□□□□□ -1.69
KRT3P12035 AC010435.1-201ENST00000623353 1177 ntBASIC4.49□□□□□ -1.69
KRT3P12035 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT3P12035 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT3P12035 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
KRT3P12035 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT3P12035 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
KRT3P12035 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT3P12035 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
KRT3P12035 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT3P12035 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
KRT3P12035 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
KRT3P12035 AC018529.3-201ENST00000624212 2254 ntBASIC4.48□□□□□ -1.69
KRT3P12035 CCT8P1-201ENST00000413611 1657 ntBASIC4.48□□□□□ -1.69
KRT3P12035 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
KRT3P12035 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.48□□□□□ -1.69
KRT3P12035 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
KRT3P12035 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.48□□□□□ -1.69
KRT3P12035 AL158163.1-201ENST00000603915 1649 ntBASIC4.48□□□□□ -1.69
KRT3P12035 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 IGKV7-3-201ENST00000357453 298 ntBASIC4.48□□□□□ -1.69
KRT3P12035 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
KRT3P12035 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 RNU4-31P-201ENST00000384211 141 ntBASIC4.48□□□□□ -1.69
KRT3P12035 RPS27AP11-201ENST00000402798 447 ntBASIC4.48□□□□□ -1.69
KRT3P12035 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.48□□□□□ -1.69
KRT3P12035 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 NRBF2P2-201ENST00000413087 861 ntBASIC4.48□□□□□ -1.69
KRT3P12035 P2RY10P2-201ENST00000416730 913 ntBASIC4.48□□□□□ -1.69
KRT3P12035 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT3P12035 AL732292.1-201ENST00000426692 226 ntBASIC4.48□□□□□ -1.69
KRT3P12035 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT3P12035 HLA-N-201ENST00000437516 135 ntBASIC4.48□□□□□ -1.69
KRT3P12035 CEACAMP9-201ENST00000442990 513 ntBASIC4.48□□□□□ -1.69
KRT3P12035 RNFT1P2-201ENST00000443064 757 ntBASIC4.48□□□□□ -1.69
KRT3P12035 AC239809.1-201ENST00000450470 217 ntBASIC4.48□□□□□ -1.69
KRT3P12035 HMGB1P26-201ENST00000452520 628 ntBASIC4.48□□□□□ -1.69
KRT3P12035 RPS23P1-201ENST00000491662 432 ntBASIC4.48□□□□□ -1.69
KRT3P12035 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT3P12035 AC025459.1-201ENST00000504072 156 ntBASIC4.48□□□□□ -1.69
KRT3P12035 AL592156.1-201ENST00000508758 304 ntBASIC4.48□□□□□ -1.69
KRT3P12035 AC006499.6-201ENST00000511169 607 ntBASIC4.48□□□□□ -1.69
KRT3P12035 SNORA31.13-201ENST00000516624 135 ntBASIC4.48□□□□□ -1.69
KRT3P12035 CIR1P1-201ENST00000524055 1133 ntBASIC4.48□□□□□ -1.69
KRT3P12035 TRAV8-5-201ENST00000537369 341 ntBASIC4.48□□□□□ -1.69
KRT3P12035 MTND4LP25-201ENST00000570218 163 ntBASIC4.48□□□□□ -1.69
KRT3P12035 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT3P12035 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT3P12035 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 BNIP3P19-201ENST00000605397 577 ntBASIC4.48□□□□□ -1.69
KRT3P12035 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT3P12035 AC009318.3-201ENST00000616916 503 ntBASIC4.48□□□□□ -1.69
KRT3P12035 AC016957.2-201ENST00000616998 848 ntBASIC4.48□□□□□ -1.69
KRT3P12035 AC080188.3-201ENST00000624842 748 ntBASIC4.48□□□□□ -1.69
KRT3P12035 AC008013.2-202ENST00000637965 364 ntBASIC4.48□□□□□ -1.69
KRT3P12035 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
KRT3P12035 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 Z73965.1-201ENST00000623412 2297 ntBASIC4.48□□□□□ -1.69
KRT3P12035 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT3P12035 AC053481.2-202ENST00000582394 1500 ntBASIC4.47□□□□□ -1.69
KRT3P12035 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.47□□□□□ -1.69
KRT3P12035 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT3P12035 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
KRT3P12035 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT3P12035 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
KRT3P12035 RNU6-1279P-201ENST00000383917 103 ntBASIC4.47□□□□□ -1.69
KRT3P12035 RNU6-185P-201ENST00000384421 107 ntBASIC4.47□□□□□ -1.69
KRT3P12035 RNU6-1005P-201ENST00000384519 107 ntBASIC4.47□□□□□ -1.69
KRT3P12035 ATP5F1P6-201ENST00000402768 767 ntBASIC4.47□□□□□ -1.69
KRT3P12035 RPL23AP48-201ENST00000406913 488 ntBASIC4.47□□□□□ -1.69
KRT3P12035 RNA5SP36-201ENST00000410197 133 ntBASIC4.47□□□□□ -1.69
KRT3P12035 RN7SKP235-201ENST00000410662 305 ntBASIC4.47□□□□□ -1.69
KRT3P12035 MFSD13B-201ENST00000420133 1290 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT3P12035 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.47□□□□□ -1.69
KRT3P12035 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT3P12035 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 AC005229.2-201ENST00000456995 399 ntBASIC4.47□□□□□ -1.69
KRT3P12035 RN7SL459P-201ENST00000481078 302 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC011037.1-201ENST00000483964 558 ntBASIC4.47□□□□□ -1.69
KRT3P12035 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 BNIP3P41-201ENST00000503774 571 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC025674.1-201ENST00000507074 324 ntBASIC4.47□□□□□ -1.69
KRT3P12035 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRT3P12035 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.47□□□□□ -1.69
KRT3P12035 RNU6-467P-201ENST00000517027 110 ntBASIC4.47□□□□□ -1.69
KRT3P12035 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms