Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.44□□□□□ -1.38
TOP2AP11388 AC093663.1-201ENST00000497190 394 ntBASIC6.44□□□□□ -1.38
TOP2AP11388 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.44□□□□□ -1.38
TOP2AP11388 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.44□□□□□ -1.38
TOP2AP11388 AC010591.1-201ENST00000603941 649 ntBASIC6.44□□□□□ -1.38
TOP2AP11388 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TOP2AP11388 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TOP2AP11388 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TOP2AP11388 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TOP2AP11388 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.43□□□□□ -1.38
TOP2AP11388 RNA5SP120-201ENST00000410900 112 ntBASIC6.43□□□□□ -1.38
TOP2AP11388 AL512649.1-201ENST00000428997 581 ntBASIC6.43□□□□□ -1.38
TOP2AP11388 TPTE2P3-201ENST00000441562 1189 ntBASIC6.43□□□□□ -1.38
TOP2AP11388 AC010285.3-201ENST00000511668 676 ntBASIC6.43□□□□□ -1.38
TOP2AP11388 RNU6-513P-201ENST00000516104 104 ntBASIC6.43□□□□□ -1.38
TOP2AP11388 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.43□□□□□ -1.38
TOP2AP11388 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.43□□□□□ -1.38
TOP2AP11388 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.43□□□□□ -1.38
TOP2AP11388 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
TOP2AP11388 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
TOP2AP11388 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TOP2AP11388 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TOP2AP11388 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TOP2AP11388 AC118273.1-201ENST00000525324 3006 ntBASIC6.42□□□□□ -1.38
TOP2AP11388 MIR634-201ENST00000385208 97 ntBASIC6.42□□□□□ -1.38
TOP2AP11388 SNORD17-201ENST00000390930 237 ntBASIC6.42□□□□□ -1.38
TOP2AP11388 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.42□□□□□ -1.38
TOP2AP11388 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.42□□□□□ -1.38
TOP2AP11388 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.42□□□□□ -1.38
TOP2AP11388 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
TOP2AP11388 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.42□□□□□ -1.38
TOP2AP11388 AC011816.2-201ENST00000607089 556 ntBASIC6.42□□□□□ -1.38
TOP2AP11388 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.42□□□□□ -1.38
TOP2AP11388 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TOP2AP11388 IPO8P1-201ENST00000455509 3109 ntBASIC6.42□□□□□ -1.38
TOP2AP11388 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TOP2AP11388 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TOP2AP11388 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.41□□□□□ -1.38
TOP2AP11388 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TOP2AP11388 RPS29P2-201ENST00000479278 136 ntBASIC6.41□□□□□ -1.38
TOP2AP11388 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.41□□□□□ -1.38
TOP2AP11388 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.41□□□□□ -1.38
TOP2AP11388 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.41□□□□□ -1.38
TOP2AP11388 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.41□□□□□ -1.38
TOP2AP11388 MIR4298-201ENST00000584380 73 ntBASIC6.41□□□□□ -1.38
TOP2AP11388 AC015722.2-201ENST00000622210 551 ntBASIC6.41□□□□□ -1.38
TOP2AP11388 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.41□□□□□ -1.38
TOP2AP11388 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TOP2AP11388 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TOP2AP11388 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TOP2AP11388 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.41□□□□□ -1.38
TOP2AP11388 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
TOP2AP11388 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TOP2AP11388 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TOP2AP11388 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.4□□□□□ -1.38
TOP2AP11388 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.4□□□□□ -1.38
TOP2AP11388 YPEL5P2-201ENST00000605553 359 ntBASIC6.4□□□□□ -1.38
TOP2AP11388 AC128687.2-201ENST00000609657 566 ntBASIC6.4□□□□□ -1.38
TOP2AP11388 AC069209.1-201ENST00000619282 651 ntBASIC6.4□□□□□ -1.38
TOP2AP11388 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TOP2AP11388 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TOP2AP11388 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TOP2AP11388 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TOP2AP11388 RNU1-108P-201ENST00000362556 161 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 HMGB3P20-201ENST00000417997 600 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 AL691447.1-201ENST00000419456 387 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.4□□□□□ -1.39
TOP2AP11388 SDCBPP2-201ENST00000424643 885 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.4□□□□□ -1.39
TOP2AP11388 RPS15AP29-201ENST00000445539 400 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 AGGF1P3-201ENST00000493675 1213 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TOP2AP11388 AL121839.2-201ENST00000565058 6943 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 AC068790.5-201ENST00000602741 355 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 AL137843.1-201ENST00000605078 385 ntBASIC6.4□□□□□ -1.39
TOP2AP11388 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
TOP2AP11388 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP2AP11388 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP2AP11388 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP2AP11388 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC6.39□□□□□ -1.39
TOP2AP11388 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.39□□□□□ -1.39
TOP2AP11388 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP2AP11388 MIR128-1-201ENST00000384921 82 ntBASIC6.39□□□□□ -1.39
TOP2AP11388 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.39□□□□□ -1.39
TOP2AP11388 AC017079.2-201ENST00000416102 485 ntBASIC6.39□□□□□ -1.39
TOP2AP11388 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.39□□□□□ -1.39
TOP2AP11388 AC104849.1-201ENST00000462623 405 ntBASIC6.39□□□□□ -1.39
TOP2AP11388 RPL5P24-201ENST00000463742 885 ntBASIC6.39□□□□□ -1.39
TOP2AP11388 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.39□□□□□ -1.39
TOP2AP11388 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.39□□□□□ -1.39
TOP2AP11388 AC023161.2-201ENST00000551218 780 ntBASIC6.39□□□□□ -1.39
TOP2AP11388 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TOP2AP11388 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TOP2AP11388 AC093535.2-201ENST00000624769 2326 ntBASIC6.39□□□□□ -1.39
TOP2AP11388 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP2AP11388 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.38□□□□□ -1.39
TOP2AP11388 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TOP2AP11388 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOP2AP11388 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms