Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
TOP1P11387 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TOP1P11387 AC007390.2-201ENST00000606229 3803 ntBASIC4.78□□□□□ -1.64
TOP1P11387 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TOP1P11387 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TOP1P11387 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TOP1P11387 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TOP1P11387 RNA5SP513-201ENST00000364648 118 ntBASIC4.78□□□□□ -1.64
TOP1P11387 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.78□□□□□ -1.64
TOP1P11387 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.78□□□□□ -1.64
TOP1P11387 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.78□□□□□ -1.64
TOP1P11387 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TOP1P11387 RPS12P5-201ENST00000423449 371 ntBASIC4.78□□□□□ -1.64
TOP1P11387 AL358472.1-201ENST00000431295 329 ntBASIC4.78□□□□□ -1.64
TOP1P11387 RPS4XP4-201ENST00000443195 763 ntBASIC4.78□□□□□ -1.64
TOP1P11387 RPL21P89-201ENST00000444021 467 ntBASIC4.78□□□□□ -1.64
TOP1P11387 BUD31P2-201ENST00000449374 300 ntBASIC4.78□□□□□ -1.64
TOP1P11387 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.78□□□□□ -1.64
TOP1P11387 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.78□□□□□ -1.64
TOP1P11387 RN7SL585P-201ENST00000470538 280 ntBASIC4.78□□□□□ -1.64
TOP1P11387 RPL29P14-201ENST00000495837 428 ntBASIC4.78□□□□□ -1.64
TOP1P11387 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.78□□□□□ -1.64
TOP1P11387 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.78□□□□□ -1.64
TOP1P11387 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.78□□□□□ -1.64
TOP1P11387 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.78□□□□□ -1.64
TOP1P11387 BNIP3P5-201ENST00000562290 498 ntBASIC4.78□□□□□ -1.64
TOP1P11387 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.78□□□□□ -1.64
TOP1P11387 RPL23AP87-202ENST00000573039 466 ntBASIC4.78□□□□□ -1.64
TOP1P11387 AC114878.2-201ENST00000604863 1251 ntBASIC4.78□□□□□ -1.64
TOP1P11387 AC012603.1-201ENST00000606424 528 ntBASIC4.78□□□□□ -1.64
TOP1P11387 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TOP1P11387 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.78□□□□□ -1.64
TOP1P11387 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.78□□□□□ -1.64
TOP1P11387 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TOP1P11387 ZNF962P-201ENST00000443465 3140 ntBASIC4.77□□□□□ -1.65
TOP1P11387 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TOP1P11387 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TOP1P11387 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TOP1P11387 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.77□□□□□ -1.65
TOP1P11387 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TOP1P11387 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TOP1P11387 RNU6-628P-201ENST00000410675 107 ntBASIC4.77□□□□□ -1.65
TOP1P11387 RNA5SP39-201ENST00000411245 120 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP1P11387 AC073464.3-201ENST00000422564 712 ntBASIC4.77□□□□□ -1.65
TOP1P11387 BX119904.1-201ENST00000432026 348 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AL451050.1-201ENST00000450126 415 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AC005912.1-201ENST00000495392 255 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AC139783.2-201ENST00000504847 1145 ntBASIC4.77□□□□□ -1.65
TOP1P11387 RNU7-143P-201ENST00000516781 65 ntBASIC4.77□□□□□ -1.65
TOP1P11387 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP1P11387 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.77□□□□□ -1.65
TOP1P11387 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.77□□□□□ -1.65
TOP1P11387 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP1P11387 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.77□□□□□ -1.65
TOP1P11387 AC012417.1-201ENST00000582307 1039 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AC110743.1-201ENST00000584870 478 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AC117490.2-201ENST00000610042 594 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AC090246.1-201ENST00000616499 426 ntBASIC4.77□□□□□ -1.65
TOP1P11387 AC074276.2-201ENST00000619891 348 ntBASIC4.77□□□□□ -1.65
TOP1P11387 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
TOP1P11387 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TOP1P11387 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TOP1P11387 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TOP1P11387 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.77□□□□□ -1.65
TOP1P11387 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TOP1P11387 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 Z82217.1-201ENST00000625157 8149 ntBASIC4.76□□□□□ -1.65
TOP1P11387 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.76□□□□□ -1.65
TOP1P11387 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.76□□□□□ -1.65
TOP1P11387 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TOP1P11387 MIR92A2-201ENST00000385299 75 ntBASIC4.76□□□□□ -1.65
TOP1P11387 AC240504.1-201ENST00000395709 845 ntBASIC4.76□□□□□ -1.65
TOP1P11387 JKAMPP1-201ENST00000413804 919 ntBASIC4.76□□□□□ -1.65
TOP1P11387 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 OR5BE1P-201ENST00000425977 939 ntBASIC4.76□□□□□ -1.65
TOP1P11387 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.76□□□□□ -1.65
TOP1P11387 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.76□□□□□ -1.65
TOP1P11387 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.76□□□□□ -1.65
TOP1P11387 HMGB3P21-201ENST00000452483 547 ntBASIC4.76□□□□□ -1.65
TOP1P11387 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.76□□□□□ -1.65
TOP1P11387 AC092691.2-201ENST00000461787 803 ntBASIC4.76□□□□□ -1.65
TOP1P11387 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
TOP1P11387 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.76□□□□□ -1.65
TOP1P11387 TPT1P3-201ENST00000492841 512 ntBASIC4.76□□□□□ -1.65
TOP1P11387 PPM1AP1-201ENST00000502740 1135 ntBASIC4.76□□□□□ -1.65
TOP1P11387 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.76□□□□□ -1.65
TOP1P11387 AC025554.1-201ENST00000505641 188 ntBASIC4.76□□□□□ -1.65
TOP1P11387 FTH1P21-201ENST00000512179 511 ntBASIC4.76□□□□□ -1.65
TOP1P11387 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
TOP1P11387 SEC11B-201ENST00000518383 499 ntBASIC4.76□□□□□ -1.65
TOP1P11387 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.76□□□□□ -1.65
TOP1P11387 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.76□□□□□ -1.65
TOP1P11387 AGGF1P6-201ENST00000569213 976 ntBASIC4.76□□□□□ -1.65
TOP1P11387 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.76□□□□□ -1.65
TOP1P11387 MTCO2P22-201ENST00000603246 681 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms