Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPSAP08865 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPSAP08865 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPSAP08865 MTCO1P11-201ENST00000429111 1528 ntBASIC3.83□□□□□ -1.8
RPSAP08865 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.83□□□□□ -1.8
RPSAP08865 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPSAP08865 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.83□□□□□ -1.8
RPSAP08865 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RPSAP08865 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RPSAP08865 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.82□□□□□ -1.8
RPSAP08865 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPSAP08865 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPSAP08865 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
RPSAP08865 DCAF13P1-201ENST00000495256 1330 ntBASIC3.82□□□□□ -1.8
RPSAP08865 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RPSAP08865 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RPSAP08865 HSPE1P26-201ENST00000405341 275 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AL035696.2-201ENST00000407941 709 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.82□□□□□ -1.8
RPSAP08865 RPL23AP52-201ENST00000439311 478 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.82□□□□□ -1.8
RPSAP08865 PPIAP20-201ENST00000449839 135 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AC091685.2-201ENST00000454924 864 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.82□□□□□ -1.8
RPSAP08865 RPS20P32-201ENST00000456044 356 ntBASIC3.82□□□□□ -1.8
RPSAP08865 RN7SL826P-201ENST00000479724 288 ntBASIC3.82□□□□□ -1.8
RPSAP08865 RPL5P23-201ENST00000496040 868 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.82□□□□□ -1.8
RPSAP08865 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.82□□□□□ -1.8
RPSAP08865 UBE2FP2-201ENST00000566646 462 ntBASIC3.82□□□□□ -1.8
RPSAP08865 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.82□□□□□ -1.8
RPSAP08865 AC067852.4-201ENST00000590314 478 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.82□□□□□ -1.8
RPSAP08865 AL021997.2-201ENST00000615674 271 ntBASIC3.82□□□□□ -1.8
RPSAP08865 AC140479.6-201ENST00000633535 357 ntBASIC3.82□□□□□ -1.8
RPSAP08865 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPSAP08865 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.82□□□□□ -1.8
RPSAP08865 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RPSAP08865 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RPSAP08865 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 RAD1P1-201ENST00000231383 813 ntBASIC3.81□□□□□ -1.8
RPSAP08865 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RPSAP08865 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RPSAP08865 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 RNA5SP175-201ENST00000364275 119 ntBASIC3.81□□□□□ -1.8
RPSAP08865 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 GTF3AP1-201ENST00000416942 1004 ntBASIC3.81□□□□□ -1.8
RPSAP08865 RPL31P12-201ENST00000422587 358 ntBASIC3.81□□□□□ -1.8
RPSAP08865 AC093084.1-201ENST00000424233 687 ntBASIC3.81□□□□□ -1.8
RPSAP08865 RPL23AP1-201ENST00000428990 471 ntBASIC3.81□□□□□ -1.8
RPSAP08865 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.81□□□□□ -1.8
RPSAP08865 AL627308.1-201ENST00000435693 821 ntBASIC3.81□□□□□ -1.8
RPSAP08865 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.81□□□□□ -1.8
RPSAP08865 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.81□□□□□ -1.8
RPSAP08865 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.81□□□□□ -1.8
RPSAP08865 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.81□□□□□ -1.8
RPSAP08865 AC053481.1-201ENST00000467217 306 ntBASIC3.81□□□□□ -1.8
RPSAP08865 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RPSAP08865 ARL2BPP6-201ENST00000512757 439 ntBASIC3.81□□□□□ -1.8
RPSAP08865 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.81□□□□□ -1.8
RPSAP08865 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.81□□□□□ -1.8
RPSAP08865 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.81□□□□□ -1.8
RPSAP08865 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.81□□□□□ -1.8
RPSAP08865 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.81□□□□□ -1.8
RPSAP08865 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.81□□□□□ -1.8
RPSAP08865 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.81□□□□□ -1.8
RPSAP08865 RPL23AP87-202ENST00000573039 466 ntBASIC3.81□□□□□ -1.8
RPSAP08865 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.81□□□□□ -1.8
RPSAP08865 AC090246.1-201ENST00000616499 426 ntBASIC3.81□□□□□ -1.8
RPSAP08865 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.81□□□□□ -1.8
RPSAP08865 AC087385.3-201ENST00000620477 187 ntBASIC3.81□□□□□ -1.8
RPSAP08865 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.81□□□□□ -1.8
RPSAP08865 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.81□□□□□ -1.8
RPSAP08865 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.81□□□□□ -1.8
RPSAP08865 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 CR788268.1-201ENST00000603931 1809 ntBASIC3.81□□□□□ -1.8
RPSAP08865 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
RPSAP08865 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPSAP08865 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.8□□□□□ -1.8
RPSAP08865 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPSAP08865 AC073073.2-201ENST00000609827 2578 ntBASIC3.8□□□□□ -1.8
RPSAP08865 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPSAP08865 AC021755.1-201ENST00000559747 1447 ntBASIC3.8□□□□□ -1.8
RPSAP08865 AL021368.2-201ENST00000606125 5352 ntBASIC3.8□□□□□ -1.8
RPSAP08865 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.8□□□□□ -1.8
RPSAP08865 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.8□□□□□ -1.8
RPSAP08865 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.8□□□□□ -1.8
RPSAP08865 SNORA57.3-201ENST00000411095 141 ntBASIC3.8□□□□□ -1.8
RPSAP08865 PRELID3BP11-201ENST00000414230 479 ntBASIC3.8□□□□□ -1.8
RPSAP08865 LIPT1P1-201ENST00000415870 1186 ntBASIC3.8□□□□□ -1.8
RPSAP08865 VN1R54P-201ENST00000435210 1049 ntBASIC3.8□□□□□ -1.8
RPSAP08865 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.8□□□□□ -1.8
RPSAP08865 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
RPSAP08865 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.8□□□□□ -1.8
RPSAP08865 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.8□□□□□ -1.8
RPSAP08865 RN7SKP60-201ENST00000516985 239 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms