Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5□□□□□ -1.61
COL5A2P05997 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5□□□□□ -1.61
COL5A2P05997 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 AL355365.1-201ENST00000616480 294 ntBASIC5□□□□□ -1.61
COL5A2P05997 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 SPATA31D2P-201ENST00000429999 4388 ntBASIC5□□□□□ -1.61
COL5A2P05997 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5□□□□□ -1.61
COL5A2P05997 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 SEPT7P8-201ENST00000413308 775 ntBASIC5□□□□□ -1.61
COL5A2P05997 OR4K6P-201ENST00000416478 897 ntBASIC5□□□□□ -1.61
COL5A2P05997 AC005300.1-201ENST00000428401 373 ntBASIC5□□□□□ -1.61
COL5A2P05997 AC073063.1-201ENST00000434352 607 ntBASIC5□□□□□ -1.61
COL5A2P05997 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5□□□□□ -1.61
COL5A2P05997 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5□□□□□ -1.61
COL5A2P05997 RPL5P24-201ENST00000463742 885 ntBASIC5□□□□□ -1.61
COL5A2P05997 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A2P05997 RNA5SP208-201ENST00000516156 78 ntBASIC5□□□□□ -1.61
COL5A2P05997 AC069240.1-201ENST00000548774 375 ntBASIC5□□□□□ -1.61
COL5A2P05997 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5□□□□□ -1.61
COL5A2P05997 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5□□□□□ -1.61
COL5A2P05997 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5□□□□□ -1.61
COL5A2P05997 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
COL5A2P05997 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5□□□□□ -1.61
COL5A2P05997 AC002069.2-201ENST00000603580 883 ntBASIC5□□□□□ -1.61
COL5A2P05997 AL354950.1-201ENST00000614150 568 ntBASIC5□□□□□ -1.61
COL5A2P05997 AL162574.2-201ENST00000614618 657 ntBASIC5□□□□□ -1.61
COL5A2P05997 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5□□□□□ -1.61
COL5A2P05997 AL773545.4-201ENST00000637262 310 ntBASIC5□□□□□ -1.61
COL5A2P05997 AL513478.4-201ENST00000641636 310 ntBASIC5□□□□□ -1.61
COL5A2P05997 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL5A2P05997 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL5A2P05997 AC003985.2-201ENST00000562268 1669 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 NAMPTP1-201ENST00000440465 2514 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL5A2P05997 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL5A2P05997 MFSD8-236ENST00000641509 4050 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.99□□□□□ -1.61
COL5A2P05997 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL5A2P05997 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.99□□□□□ -1.61
COL5A2P05997 NPM1P38-201ENST00000403835 865 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 ATP5JP1-201ENST00000431631 322 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 TRIM60P13-201ENST00000432350 1283 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 AC026784.1-201ENST00000507986 352 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.99□□□□□ -1.61
COL5A2P05997 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.99□□□□□ -1.61
COL5A2P05997 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.99□□□□□ -1.61
COL5A2P05997 AP003168.1-201ENST00000530091 307 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.99□□□□□ -1.61
COL5A2P05997 SNRPGP1-201ENST00000553864 222 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.99□□□□□ -1.61
COL5A2P05997 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.99□□□□□ -1.61
COL5A2P05997 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.99□□□□□ -1.61
COL5A2P05997 AL354760.1-201ENST00000608357 643 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 AC095038.2-201ENST00000621464 1070 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 AP000720.1-201ENST00000625091 483 ntBASIC4.99□□□□□ -1.61
COL5A2P05997 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.99□□□□□ -1.61
COL5A2P05997 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL5A2P05997 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL5A2P05997 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL5A2P05997 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.99□□□□□ -1.61
COL5A2P05997 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL5A2P05997 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.98□□□□□ -1.61
COL5A2P05997 SAMMSON-213ENST00000641336 1521 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 RNU6-167P-201ENST00000384292 106 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 MIR128-1-201ENST00000384921 82 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 AL122016.1-201ENST00000403365 367 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.98□□□□□ -1.61
COL5A2P05997 AC017078.1-201ENST00000416146 368 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 RPS6P14-201ENST00000425165 719 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 BTBD7P2-201ENST00000441962 620 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 OR52Y1P-201ENST00000452418 828 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.98□□□□□ -1.61
COL5A2P05997 RBMY2UP-201ENST00000453474 324 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 AC006511.1-201ENST00000470614 315 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.98□□□□□ -1.61
COL5A2P05997 AC008802.1-201ENST00000519121 791 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 IGLV3-26-201ENST00000520756 302 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.98□□□□□ -1.61
COL5A2P05997 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.98□□□□□ -1.61
COL5A2P05997 AC007066.2-202ENST00000566531 914 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.98□□□□□ -1.61
COL5A2P05997 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.98□□□□□ -1.61
COL5A2P05997 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.98□□□□□ -1.61
COL5A2P05997 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.98□□□□□ -1.61
COL5A2P05997 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.98□□□□□ -1.61
COL5A2P05997 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms