Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A1P02462 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.45□□□□□ -1.7
COL4A1P02462 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A1P02462 RPL21P12-201ENST00000559810 515 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC011266.1-201ENST00000624119 3569 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.45□□□□□ -1.7
COL4A1P02462 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL4A1P02462 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL4A1P02462 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC007656.2-201ENST00000624902 4547 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A1P02462 RN7SKP53-201ENST00000411337 315 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC093663.1-201ENST00000497190 394 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC005476.1-201ENST00000554427 397 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A1P02462 AC067852.3-201ENST00000589177 561 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 AC012493.2-201ENST00000595083 291 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.45□□□□□ -1.7
COL4A1P02462 AP001002.2-201ENST00000625137 386 ntBASIC4.45□□□□□ -1.7
COL4A1P02462 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
COL4A1P02462 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.44□□□□□ -1.7
COL4A1P02462 AC068254.2-201ENST00000623938 3577 ntBASIC4.44□□□□□ -1.7
COL4A1P02462 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
COL4A1P02462 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL4A1P02462 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
COL4A1P02462 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL4A1P02462 AL133383.2-201ENST00000622958 2336 ntBASIC4.44□□□□□ -1.7
COL4A1P02462 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL4A1P02462 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.44□□□□□ -1.7
COL4A1P02462 IPO8P1-201ENST00000455509 3109 ntBASIC4.44□□□□□ -1.7
COL4A1P02462 AL139039.2-201ENST00000407436 479 ntBASIC4.44□□□□□ -1.7
COL4A1P02462 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.44□□□□□ -1.7
COL4A1P02462 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.44□□□□□ -1.7
COL4A1P02462 CYCSP35-201ENST00000451978 304 ntBASIC4.44□□□□□ -1.7
COL4A1P02462 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.44□□□□□ -1.7
COL4A1P02462 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.44□□□□□ -1.7
COL4A1P02462 SETP6-201ENST00000479329 568 ntBASIC4.44□□□□□ -1.7
COL4A1P02462 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.44□□□□□ -1.7
COL4A1P02462 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.44□□□□□ -1.7
COL4A1P02462 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.44□□□□□ -1.7
COL4A1P02462 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.44□□□□□ -1.7
COL4A1P02462 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.44□□□□□ -1.7
COL4A1P02462 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.44□□□□□ -1.7
COL4A1P02462 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.44□□□□□ -1.7
COL4A1P02462 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.44□□□□□ -1.7
COL4A1P02462 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL4A1P02462 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL4A1P02462 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A1P02462 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A1P02462 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A1P02462 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
COL4A1P02462 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A1P02462 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
COL4A1P02462 BMS1P3-201ENST00000372011 932 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.43□□□□□ -1.7
COL4A1P02462 BX323014.1-201ENST00000412876 237 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 CBX1P3-201ENST00000413296 527 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.43□□□□□ -1.7
COL4A1P02462 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.43□□□□□ -1.7
COL4A1P02462 AC026784.1-201ENST00000507986 352 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 RN7SKP57-201ENST00000517248 293 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.43□□□□□ -1.7
COL4A1P02462 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.43□□□□□ -1.7
COL4A1P02462 MIR4298-201ENST00000584380 73 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 OR7A8P-201ENST00000595427 913 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.43□□□□□ -1.7
COL4A1P02462 BNIP3P11-201ENST00000603878 563 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 AC010591.1-201ENST00000603941 649 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 AC128687.2-201ENST00000609657 566 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A1P02462 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.43□□□□□ -1.7
COL4A1P02462 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A1P02462 TCP1P3-201ENST00000414406 1498 ntBASIC4.43□□□□□ -1.7
COL4A1P02462 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
COL4A1P02462 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.43□□□□□ -1.7
COL4A1P02462 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
COL4A1P02462 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL4A1P02462 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A1P02462 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
COL4A1P02462 AC139426.3-201ENST00000605648 2059 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms