Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC107021.2-201ENST00000567714 2095 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 RNU4-22P-201ENST00000411058 166 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC092638.1-201ENST00000411966 1275 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 HMGB3P31-201ENST00000413333 595 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 MFSD13B-201ENST00000420133 1290 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 OR8F1P-201ENST00000425243 930 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 FO393419.3-201ENST00000428741 282 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC091544.1-201ENST00000484702 348 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 TRMT10BP1-201ENST00000519377 943 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AC012321.1-201ENST00000561622 1588 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RAPGEF3O95398 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RAPGEF3O95398 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.72□□□□□ -1.33
RAPGEF3O95398 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.72□□□□□ -1.33
RAPGEF3O95398 AL136164.3-201ENST00000624429 3978 ntBASIC6.71□□□□□ -1.33
RAPGEF3O95398 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6.71□□□□□ -1.33
RAPGEF3O95398 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC104260.2-201ENST00000623551 3497 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RAPGEF3O95398 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RAPGEF3O95398 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RAPGEF3O95398 AP000580.1-201ENST00000404439 358 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 MTCO3P4-201ENST00000419236 787 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 AL513175.2-201ENST00000422071 443 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 USP9YP11-201ENST00000427537 717 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 AL589880.1-201ENST00000448271 287 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 OR51B8P-201ENST00000449892 769 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 AP000563.1-201ENST00000490865 758 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC023050.1-201ENST00000498198 304 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 CDH12P2-201ENST00000504393 298 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC016839.1-201ENST00000578162 867 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC079587.1-201ENST00000603846 277 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.71□□□□□ -1.34
RAPGEF3O95398 RNU4-89P-201ENST00000607443 133 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 AC073569.3-201ENST00000619055 682 ntBASIC6.71□□□□□ -1.34
RAPGEF3O95398 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RAPGEF3O95398 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RAPGEF3O95398 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RAPGEF3O95398 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RAPGEF3O95398 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 LINC00622-201ENST00000562811 1570 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 RNA5SP119-201ENST00000362715 117 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 RNU4-51P-201ENST00000364206 140 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 MIR142-201ENST00000384835 87 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 AL136310.1-201ENST00000404926 654 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 RPS3AP37-201ENST00000419176 745 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 AL592437.1-201ENST00000443781 492 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 HSPE1P5-201ENST00000561489 272 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 AC093783.1-201ENST00000612976 329 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 MAPK10-304ENST00000641341 3984 ntBASIC6.7□□□□□ -1.34
RAPGEF3O95398 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RAPGEF3O95398 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
RAPGEF3O95398 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 RNU6-636P-201ENST00000384598 107 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 RNU6-1263P-201ENST00000384601 106 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms