Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC105233.3-201ENST00000531125 744 ntBASIC5.06□□□□□ -1.6
PROM1O43490 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.06□□□□□ -1.6
PROM1O43490 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
PROM1O43490 AC007954.1-201ENST00000554198 494 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC004825.1-201ENST00000555068 586 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.06□□□□□ -1.6
PROM1O43490 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
PROM1O43490 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.06□□□□□ -1.6
PROM1O43490 MIR548Y-201ENST00000582739 110 ntBASIC5.06□□□□□ -1.6
PROM1O43490 SS18L2P2-201ENST00000583960 235 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.06□□□□□ -1.6
PROM1O43490 FKBP1AP1-201ENST00000594588 318 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 NTAN1P1-201ENST00000603150 646 ntBASIC5.06□□□□□ -1.6
PROM1O43490 ELOCP34-201ENST00000604436 327 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC009027.1-201ENST00000604510 479 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC024940.4-201ENST00000605507 246 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC090525.3-201ENST00000605601 189 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC006270.3-201ENST00000605967 1036 ntBASIC5.06□□□□□ -1.6
PROM1O43490 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC005840.5-201ENST00000619166 599 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC018755.4-201ENST00000619715 454 ntBASIC5.06□□□□□ -1.6
PROM1O43490 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PROM1O43490 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 CCT8P1-201ENST00000413611 1657 ntBASIC5.05□□□□□ -1.6
PROM1O43490 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PROM1O43490 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 AC112198.2-201ENST00000426589 6996 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
PROM1O43490 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PROM1O43490 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PROM1O43490 RNU1-77P-201ENST00000390868 162 ntBASIC5.05□□□□□ -1.6
PROM1O43490 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PROM1O43490 AC136624.1-201ENST00000400791 413 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC009804.1-201ENST00000400949 179 ntBASIC5.05□□□□□ -1.6
PROM1O43490 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 HSPA8P15-201ENST00000401676 786 ntBASIC5.05□□□□□ -1.6
PROM1O43490 RNA5SP487-201ENST00000410186 122 ntBASIC5.05□□□□□ -1.6
PROM1O43490 RNU6-77P-201ENST00000410554 91 ntBASIC5.05□□□□□ -1.6
PROM1O43490 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.05□□□□□ -1.6
PROM1O43490 MTCO2P34-201ENST00000421994 607 ntBASIC5.05□□□□□ -1.6
PROM1O43490 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.05□□□□□ -1.6
PROM1O43490 DPRXP1-201ENST00000426312 460 ntBASIC5.05□□□□□ -1.6
PROM1O43490 RPS26P47-201ENST00000427219 348 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.05□□□□□ -1.6
PROM1O43490 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.05□□□□□ -1.6
PROM1O43490 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 USP9YP22-201ENST00000438971 294 ntBASIC5.05□□□□□ -1.6
PROM1O43490 MTCO1P19-201ENST00000443487 500 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AL137845.2-201ENST00000444292 988 ntBASIC5.05□□□□□ -1.6
PROM1O43490 MTCO2P25-201ENST00000447065 681 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC090804.1-201ENST00000448870 490 ntBASIC5.05□□□□□ -1.6
PROM1O43490 HMGB1P4-201ENST00000455362 567 ntBASIC5.05□□□□□ -1.6
PROM1O43490 MTND1P16-201ENST00000465177 898 ntBASIC5.05□□□□□ -1.6
PROM1O43490 RN7SL329P-201ENST00000467740 299 ntBASIC5.05□□□□□ -1.6
PROM1O43490 RPL7P40-201ENST00000481703 745 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AL024509.2-201ENST00000493462 493 ntBASIC5.05□□□□□ -1.6
PROM1O43490 RN7SL447P-201ENST00000494711 245 ntBASIC5.05□□□□□ -1.6
PROM1O43490 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.05□□□□□ -1.6
PROM1O43490 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.05□□□□□ -1.6
PROM1O43490 AC079395.1-201ENST00000510981 262 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC098976.1-201ENST00000513014 541 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC022360.1-201ENST00000521058 340 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC134698.4-201ENST00000523451 826 ntBASIC5.05□□□□□ -1.6
PROM1O43490 HMGB1P40-201ENST00000525121 540 ntBASIC5.05□□□□□ -1.6
PROM1O43490 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.05□□□□□ -1.6
PROM1O43490 AC126177.5-201ENST00000549599 178 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 AC127024.5-201ENST00000580085 462 ntBASIC5.05□□□□□ -1.6
PROM1O43490 MIR3936-201ENST00000584304 110 ntBASIC5.05□□□□□ -1.6
PROM1O43490 WISP1-OT1-201ENST00000602893 642 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC073648.5-201ENST00000603502 305 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC092354.2-201ENST00000607786 514 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC116447.1-201ENST00000613153 453 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC116165.2-201ENST00000616705 206 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC073968.1-201ENST00000618594 637 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 AC009878.1-201ENST00000621819 340 ntBASIC5.05□□□□□ -1.6
PROM1O43490 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PROM1O43490 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms