Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPL7P51-201ENST00000490532 749 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC093281.2-201ENST00000510153 597 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 HMGB3P13-201ENST00000511263 607 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 AP006245.2-201ENST00000522004 300 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 ARL2BPP5-201ENST00000523141 481 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.1□□□□□ -1.59
PHGDHO43175 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.1□□□□□ -1.59
PHGDHO43175 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC090515.3-201ENST00000560431 315 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC112220.3-201ENST00000605502 502 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC018695.5-201ENST00000605872 315 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC245008.1-201ENST00000608123 476 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.1□□□□□ -1.59
PHGDHO43175 AC005962.2-201ENST00000611427 652 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC109309.2-201ENST00000612597 332 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AC007204.2-201ENST00000615022 616 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AL731566.1-201ENST00000620490 1937 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AL445437.1-201ENST00000623157 3087 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AF246928.1-201ENST00000623768 87 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 AP000648.2-201ENST00000624182 404 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 SNORA17.5-201ENST00000630429 132 ntBASIC5.1□□□□□ -1.59
PHGDHO43175 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PHGDHO43175 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHGDHO43175 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
PHGDHO43175 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.1□□□□□ -1.59
PHGDHO43175 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC026523.2-201ENST00000625039 7739 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 ZNF652P1-201ENST00000442420 1309 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PHGDHO43175 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 SNORA4.1-201ENST00000364263 144 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AL078604.1-201ENST00000404609 466 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 QRSL1P2-201ENST00000418582 964 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 RNA5SP103-201ENST00000459503 118 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC091180.1-201ENST00000462104 372 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 FTH1P24-201ENST00000503502 462 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 ATP1B1P1-201ENST00000509767 915 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 MTATP6P1-201ENST00000514057 681 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC090819.1-201ENST00000523800 1111 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 SLC2A13P1-201ENST00000531560 322 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC063949.1-201ENST00000552900 865 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHGDHO43175 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.09□□□□□ -1.59
PHGDHO43175 AL512347.1-201ENST00000566420 503 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 SNORD95-201ENST00000579879 68 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AL589674.2-201ENST00000604304 337 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AL022161.1-201ENST00000604390 213 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC010738.1-201ENST00000604970 987 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC105129.3-201ENST00000605455 485 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AP005432.2-201ENST00000608162 586 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC004223.4-201ENST00000612426 332 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 AC120349.2-201ENST00000625002 298 ntBASIC5.09□□□□□ -1.59
PHGDHO43175 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.09□□□□□ -1.59
PHGDHO43175 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.09□□□□□ -1.59
PHGDHO43175 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms