Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC091167.4-201ENST00000605079 184 ntBASIC6.72□□□□□ -1.33
CUX2O14529 RNU1-30P-201ENST00000606575 163 ntBASIC6.72□□□□□ -1.33
CUX2O14529 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.72□□□□□ -1.33
CUX2O14529 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
CUX2O14529 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CUX2O14529 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CUX2O14529 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
CUX2O14529 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CUX2O14529 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CUX2O14529 LINC01109-201ENST00000603837 3081 ntBASIC6.71□□□□□ -1.34
CUX2O14529 AC119744.1-201ENST00000454746 1715 ntBASIC6.71□□□□□ -1.34
CUX2O14529 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.71□□□□□ -1.34
CUX2O14529 UBE2V2P4-201ENST00000447495 259 ntBASIC6.71□□□□□ -1.34
CUX2O14529 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUX2O14529 RNU2-27P-201ENST00000516185 142 ntBASIC6.71□□□□□ -1.34
CUX2O14529 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.71□□□□□ -1.34
CUX2O14529 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.71□□□□□ -1.34
CUX2O14529 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.71□□□□□ -1.34
CUX2O14529 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.71□□□□□ -1.34
CUX2O14529 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.71□□□□□ -1.34
CUX2O14529 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.71□□□□□ -1.34
CUX2O14529 AL033523.1-201ENST00000605153 153 ntBASIC6.71□□□□□ -1.34
CUX2O14529 MIR432-201ENST00000606207 94 ntBASIC6.71□□□□□ -1.34
CUX2O14529 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.71□□□□□ -1.34
CUX2O14529 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CUX2O14529 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CUX2O14529 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CUX2O14529 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUX2O14529 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CUX2O14529 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.7□□□□□ -1.34
CUX2O14529 TCP1P3-201ENST00000414406 1498 ntBASIC6.7□□□□□ -1.34
CUX2O14529 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CUX2O14529 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUX2O14529 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.7□□□□□ -1.34
CUX2O14529 HMGB3P19-201ENST00000403971 560 ntBASIC6.7□□□□□ -1.34
CUX2O14529 AL161631.1-201ENST00000417933 486 ntBASIC6.7□□□□□ -1.34
CUX2O14529 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.7□□□□□ -1.34
CUX2O14529 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.7□□□□□ -1.34
CUX2O14529 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.7□□□□□ -1.34
CUX2O14529 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
CUX2O14529 AC068790.5-201ENST00000602741 355 ntBASIC6.7□□□□□ -1.34
CUX2O14529 MIR7112-201ENST00000616126 65 ntBASIC6.7□□□□□ -1.34
CUX2O14529 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CUX2O14529 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUX2O14529 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CUX2O14529 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.7□□□□□ -1.34
CUX2O14529 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.69□□□□□ -1.34
CUX2O14529 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUX2O14529 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUX2O14529 ZYG11AP1-201ENST00000430329 837 ntBASIC6.69□□□□□ -1.34
CUX2O14529 DNAJC19P8-201ENST00000452887 259 ntBASIC6.69□□□□□ -1.34
CUX2O14529 AGGF1P3-201ENST00000493675 1213 ntBASIC6.69□□□□□ -1.34
CUX2O14529 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.69□□□□□ -1.34
CUX2O14529 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUX2O14529 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.69□□□□□ -1.34
CUX2O14529 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CUX2O14529 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.69□□□□□ -1.34
CUX2O14529 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUX2O14529 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.69□□□□□ -1.34
CUX2O14529 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUX2O14529 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.68□□□□□ -1.34
CUX2O14529 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUX2O14529 MAPK10-320ENST00000641462 6696 ntBASIC6.68□□□□□ -1.34
CUX2O14529 RNA5SP374-201ENST00000362939 125 ntBASIC6.68□□□□□ -1.34
CUX2O14529 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CUX2O14529 AC073063.1-201ENST00000434352 607 ntBASIC6.68□□□□□ -1.34
CUX2O14529 AL121890.1-201ENST00000435457 205 ntBASIC6.68□□□□□ -1.34
CUX2O14529 RAD23BP3-201ENST00000454157 1152 ntBASIC6.68□□□□□ -1.34
CUX2O14529 S100A11P2-201ENST00000467589 312 ntBASIC6.68□□□□□ -1.34
CUX2O14529 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUX2O14529 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.68□□□□□ -1.34
CUX2O14529 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.68□□□□□ -1.34
CUX2O14529 RPL21P7-201ENST00000557463 483 ntBASIC6.68□□□□□ -1.34
CUX2O14529 NCAPGP2-201ENST00000557911 754 ntBASIC6.68□□□□□ -1.34
CUX2O14529 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.68□□□□□ -1.34
CUX2O14529 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUX2O14529 OFD1P6Y-202ENST00000451061 2724 ntBASIC6.68□□□□□ -1.34
CUX2O14529 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUX2O14529 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.68□□□□□ -1.34
CUX2O14529 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CUX2O14529 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUX2O14529 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUX2O14529 AC011825.1-201ENST00000484967 388 ntBASIC6.67□□□□□ -1.34
CUX2O14529 PHBP14-201ENST00000512887 367 ntBASIC6.67□□□□□ -1.34
CUX2O14529 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.67□□□□□ -1.34
CUX2O14529 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.67□□□□□ -1.34
CUX2O14529 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CUX2O14529 AC009303.3-201ENST00000591103 736 ntBASIC6.67□□□□□ -1.34
CUX2O14529 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.67□□□□□ -1.34
CUX2O14529 BNIP3P41-202ENST00000616656 861 ntBASIC6.67□□□□□ -1.34
CUX2O14529 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.67□□□□□ -1.34
CUX2O14529 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CUX2O14529 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.67□□□□□ -1.34
CUX2O14529 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUX2O14529 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUX2O14529 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.67□□□□□ -1.34
CUX2O14529 AL133383.2-201ENST00000622958 2336 ntBASIC6.66□□□□□ -1.34
CUX2O14529 NACAP7-201ENST00000407371 609 ntBASIC6.66□□□□□ -1.34
CUX2O14529 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.66□□□□□ -1.34
CUX2O14529 ARL4AP3-201ENST00000441452 574 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms