Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.19□□□□□ -1.74
PDLIM1O00151 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PDLIM1O00151 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDLIM1O00151 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
PDLIM1O00151 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM1O00151 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM1O00151 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM1O00151 RNU4-31P-201ENST00000384211 141 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM1O00151 TAF9BP2-201ENST00000400856 499 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM1O00151 RPL30P2-201ENST00000414021 291 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 RPS23P10-201ENST00000416185 486 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AL590139.1-201ENST00000416267 400 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 ARL2BPP3-201ENST00000421226 480 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 RPEP2-201ENST00000432149 701 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC016831.4-201ENST00000438302 307 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.18□□□□□ -1.74
PDLIM1O00151 RN7SKP141-201ENST00000516167 338 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 MIR4270-201ENST00000581799 70 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC098935.2-201ENST00000604222 466 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC090525.3-201ENST00000605601 189 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC103710.3-201ENST00000608157 948 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC009318.3-201ENST00000616916 503 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 uc_338.9-201ENST00000617424 182 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.18□□□□□ -1.74
PDLIM1O00151 AC007546.2-201ENST00000623996 360 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC244205.2-202ENST00000635781 342 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 AC009452.1-201ENST00000640823 606 ntBASIC4.18□□□□□ -1.74
PDLIM1O00151 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDLIM1O00151 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PDLIM1O00151 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AC025031.4-201ENST00000621248 3271 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDLIM1O00151 RPS27AP11-201ENST00000402798 447 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AL390879.2-203ENST00000426943 1121 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 RPL17P35-201ENST00000432217 549 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 RPL34P26-201ENST00000445636 354 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 H2AFZP5-201ENST00000446960 382 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM1O00151 DDX39BP2-208ENST00000453923 258 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 RPS29P22-201ENST00000472363 168 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AC025554.1-201ENST00000505641 188 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 MTND3P24-201ENST00000506306 329 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AC010468.3-201ENST00000508225 458 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 RNU6-1004P-201ENST00000516584 111 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 CDH12P4-201ENST00000517835 295 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 CDH12P3-201ENST00000517935 295 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 CDH12P1-201ENST00000518435 295 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.17□□□□□ -1.74
PDLIM1O00151 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PDLIM1O00151 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.17□□□□□ -1.74
PDLIM1O00151 MIR4700-201ENST00000578311 74 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 MIR5047-201ENST00000579212 100 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AL671309.1-201ENST00000603750 544 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 Z98200.1-201ENST00000607298 470 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 AL161616.1-201ENST00000611867 286 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.17□□□□□ -1.74
PDLIM1O00151 AC007342.8-201ENST00000623278 678 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 AC073342.3-201ENST00000624211 193 ntBASIC4.17□□□□□ -1.74
PDLIM1O00151 MTCO1P14-201ENST00000441695 1559 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms