Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC188H7C350 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC188H7C350 DNAJC19P6-201ENST00000401853 280 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AL161631.1-201ENST00000417933 486 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC007394.1-201ENST00000421941 531 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC241520.1-201ENST00000422654 1099 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 AL132765.1-201ENST00000434165 553 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC188H7C350 UBE2V1P5-201ENST00000440070 405 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 HMGB3P9-201ENST00000441799 583 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC104306.1-201ENST00000449702 371 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 DNAJC19P8-201ENST00000452887 259 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC188H7C350 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC015908.1-201ENST00000478739 476 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC023050.1-201ENST00000498198 304 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC025554.1-201ENST00000505641 188 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 MIR4700-201ENST00000578311 74 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC188H7C350 EIF1P6-201ENST00000600054 334 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC188H7C350 ABI1P1-201ENST00000603375 1120 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC093765.1-201ENST00000603758 881 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC069304.3-201ENST00000603938 1084 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC016769.4-201ENST00000616893 535 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AL109620.1-201ENST00000618738 1197 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC103858.2-201ENST00000621471 543 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 MIR7702-201ENST00000621931 59 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 AP002371.2-201ENST00000624450 503 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 FP325313.1-201ENST00000638228 703 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 CASC19-222ENST00000641321 1173 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 SDAD1P1-202ENST00000524156 2051 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC188H7C350 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC109780.1-201ENST00000451768 1344 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC188H7C350 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC188H7C350 MIR3065-201ENST00000390137 79 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC188H7C350 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC188H7C350 RNA5SP306-201ENST00000411087 107 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC114814.2-201ENST00000419195 485 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC188H7C350 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC188H7C350 MRPL50P1-201ENST00000431951 384 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC188H7C350 PTMAP6-201ENST00000439110 327 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AL158053.1-201ENST00000441503 453 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC188H7C350 CEACAMP7-201ENST00000444105 496 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 HSFY3P-201ENST00000444242 1191 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC188H7C350 GXYLT1P1-201ENST00000446657 490 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC008953.1-201ENST00000497334 318 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC188H7C350 OR4A2P-201ENST00000527276 913 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AC084757.1-201ENST00000559987 490 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC095057.3-201ENST00000567102 1157 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 TMF1P1-201ENST00000576058 373 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 MIR4512-201ENST00000583257 77 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC012603.1-201ENST00000606424 528 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AC087385.3-201ENST00000620477 187 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AP003400.6-201ENST00000624698 740 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AC073429.2-201ENST00000569694 1444 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC188H7C350 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms