Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC012417.1-201ENST00000582307 1039 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL133338.2-201ENST00000604292 736 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL021997.2-201ENST00000615674 271 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AL590240.3-201ENST00000621416 943 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR6823-201ENST00000622118 61 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 AC008013.2-202ENST00000637965 364 ntBASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 FTO-203ENST00000460382 1517 ntTSL 5 BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHKB-CPT1BH3BT56 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 MTND4P34-201ENST00000572715 1371 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 FAM91A3P-201ENST00000456826 2544 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC108206.1-201ENST00000570186 4159 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 SNURFL-201ENST00000309296 343 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RNA5SP383-201ENST00000362934 120 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SKP250-201ENST00000363924 321 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RNA5SP87-201ENST00000384155 118 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RPS26P8-201ENST00000393490 348 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AL031121.1-201ENST00000406553 254 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL5P18-201ENST00000406671 891 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 DUTP5-201ENST00000406790 469 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 SNRPFP1-201ENST00000414761 252 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC010740.1-201ENST00000417035 684 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL7L1P9-201ENST00000431298 745 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 BX679664.1-201ENST00000434429 253 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC244505.4-201ENST00000434905 287 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 B3GNT2P1-201ENST00000434960 952 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC114495.1-201ENST00000441274 436 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 SSXP5-201ENST00000443473 287 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL21P8-201ENST00000465083 535 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SKP209-201ENST00000516888 304 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 SNORA31.26-201ENST00000517250 137 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 OR4A46P-201ENST00000527255 933 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 OR5BC1P-201ENST00000529327 739 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC004024.1-201ENST00000549244 247 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC025175.1-201ENST00000606482 759 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR6837-201ENST00000620884 64 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 FO681491.1-202ENST00000623392 737 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 MAPK10-266ENST00000641066 6555 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 AC125257.1-201ENST00000560400 2930 ntBASIC2.11□□□□□ -2.07
CHKB-CPT1BH3BT56 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 EIF2AP4-201ENST00000424793 1781 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 XPOTP1-201ENST00000443317 2398 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC002546.1-201ENST00000588041 2504 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR148B-201ENST00000362252 99 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AL136116.1-201ENST00000403591 381 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AL445189.1-201ENST00000405722 338 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 RN7SKP58-201ENST00000411010 305 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL7AP73-201ENST00000413490 353 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 MEAF6P1-201ENST00000416092 327 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AL645608.4-201ENST00000423619 154 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC012075.1-201ENST00000436549 580 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC016831.4-201ENST00000438302 307 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC105402.2-201ENST00000438503 358 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 YWHAEP1-201ENST00000453697 763 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms