Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPL7P19-201ENST00000469948 618 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 RPL21P42-201ENST00000488408 464 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 TOMM22P4-201ENST00000511318 336 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 RNA5SP318-201ENST00000516352 92 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC136777.2-201ENST00000522979 358 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC090515.3-201ENST00000560431 315 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC126323.4-201ENST00000566935 234 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 HMGB1P6-201ENST00000569046 646 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL355375.2-201ENST00000574825 175 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC079315.1-201ENST00000602952 623 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL121782.1-201ENST00000611242 413 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL365204.3-201ENST00000612448 685 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 MIR8082-201ENST00000612488 81 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 MIR6774-201ENST00000614651 70 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 MIR6883-201ENST00000614952 78 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC109446.4-201ENST00000623235 2755 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 MIR665-201ENST00000635949 72 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AC027559.1-201ENST00000636288 271 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 MIR1302-1-201ENST00000637932 143 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL161756.3-201ENST00000641216 2071 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 AL592429.1-201ENST00000403909 1473 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.44□□□□□ -1.54
SHISA3A0PJX4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
SHISA3A0PJX4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC016745.2-201ENST00000608834 3443 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 Y_RNA.58-201ENST00000362807 102 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 Y_RNA.154-201ENST00000363624 102 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RNY3P1-201ENST00000365085 102 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RNU6-359P-201ENST00000365466 108 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RNY3-201ENST00000365484 102 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RNU6-744P-201ENST00000365557 107 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 SNORA20.2-201ENST00000383922 131 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RNU6-1316P-201ENST00000384242 108 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 Y_RNA.490-201ENST00000384413 102 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RNU2-22P-201ENST00000411266 212 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 PPIAP13-201ENST00000434706 478 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC073410.1-201ENST00000435125 589 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 USP9YP15-201ENST00000442391 422 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL121578.2-201ENST00000448797 447 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AL133244.1-201ENST00000456007 258 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 TREML3P-201ENST00000457327 501 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC007537.2-201ENST00000472093 511 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 ZNF705CP-201ENST00000530515 889 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 OR5B19P-201ENST00000531766 928 ntBASIC5.43□□□□□ -1.54
SHISA3A0PJX4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.43□□□□□ -1.54
SHISA3A0PJX4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms