Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AL691449.1-201ENST00000426570 421 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 NPM1P34-201ENST00000428821 893 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 RPS6P12-201ENST00000432491 726 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 RPS17P13-201ENST00000448974 407 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 RPL21P11-201ENST00000461458 483 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 PPIAP21-201ENST00000464473 501 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 RPL23AP71-201ENST00000470966 469 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 OR4A12P-201ENST00000530847 918 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC135001.1-201ENST00000544546 283 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AC069366.1-201ENST00000583159 838 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 MIR492-201ENST00000638676 116 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 AL133412.1-201ENST00000380194 2992 ntBASIC3.75□□□□□ -1.81
VPS29Q9UBQ0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 IQCB2P-201ENST00000401788 1633 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 RPS26P8-201ENST00000393490 348 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AL450992.3-201ENST00000413192 568 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AL356095.1-201ENST00000417217 199 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC234779.1-201ENST00000425910 285 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 RPL23AP4-201ENST00000427757 463 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC016712.1-201ENST00000431088 378 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 TBCAP1-201ENST00000436520 327 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AF228730.2-201ENST00000438784 848 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC092013.1-201ENST00000438795 332 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 RPS3AP6-201ENST00000484430 795 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC110792.1-201ENST00000491826 472 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC146944.2-203ENST00000502493 354 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC139495.1-202ENST00000513164 354 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC087369.1-201ENST00000520775 996 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC068714.1-201ENST00000559623 800 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 MIR4700-201ENST00000578311 74 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 EIF1P6-201ENST00000600054 334 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC068790.5-201ENST00000602741 355 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 MIR486-1-201ENST00000612171 68 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AC112484.5-201ENST00000624189 228 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 ATE1-AS1-202ENST00000636460 506 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 RLIMP1-201ENST00000339626 1680 ntBASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
VPS29Q9UBQ0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 SNORA56-201ENST00000383966 129 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 HLFP1-201ENST00000402375 499 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AL022722.2-201ENST00000402519 180 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 ZNF603P-201ENST00000405613 487 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 RNU4-6P-201ENST00000410804 122 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 RNU6-233P-201ENST00000410845 141 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 RCC2P2-201ENST00000422174 918 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 FAR2P4-202ENST00000425399 584 ntBASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS29Q9UBQ0 METTL15P1-201ENST00000481421 1045 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms