Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MTND5P3-201ENST00000438536 1800 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC015799.1-201ENST00000622996 3122 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 OR52B3P-201ENST00000314715 928 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 SNORA23-201ENST00000365128 182 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AL450124.1-201ENST00000376401 353 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 Y_RNA.419-201ENST00000384041 102 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RN7SKP152-201ENST00000410444 315 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RNA5SP265-201ENST00000411023 111 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RPL30P2-201ENST00000414021 291 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 GJA6P-201ENST00000415117 1042 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 FKBP1AP3-201ENST00000423650 319 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RPL21P112-201ENST00000434403 463 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 PPIAP10-201ENST00000438675 458 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC107399.1-201ENST00000451226 265 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC011225.1-201ENST00000457751 369 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 SNRPD2P1-201ENST00000489253 354 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RN7SL101P-201ENST00000496350 279 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RPS24P16-201ENST00000497294 392 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC027338.2-201ENST00000504382 526 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RN7SKP190-201ENST00000516079 286 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 RNU6-390P-201ENST00000516259 103 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 SNORA25.17-201ENST00000517184 124 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC008638.3-201ENST00000603341 463 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC090971.5-201ENST00000621102 293 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AL445363.3-201ENST00000623080 671 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 BTBD10P1-201ENST00000549824 1352 ntBASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AL356489.2-201ENST00000566968 3528 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 THAP12P5-201ENST00000405864 2275 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 RNU6-550P-201ENST00000391057 101 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 STSP1-201ENST00000412493 1151 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 RPL10P5-201ENST00000427719 639 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AL359711.1-201ENST00000441999 123 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 SFTPA3P-201ENST00000446429 367 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 RN7SL630P-201ENST00000483714 297 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 KLF7P1-201ENST00000490941 1048 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AC233724.1-201ENST00000503894 233 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AP005597.3-201ENST00000532369 799 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AP000889.2-201ENST00000532684 490 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 DNM1P33-201ENST00000565222 270 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 MIR3941-201ENST00000582572 103 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 AC006116.10-201ENST00000591836 581 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 RNA5SP108-201ENST00000605921 117 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 HSP90AA5P-201ENST00000438353 2192 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 MTND4P27-201ENST00000450813 1354 ntBASIC8.6□□□□□ -1.03
RTN4Q9NQC3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RTN4Q9NQC3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms