Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AP002001.2-201ENST00000529025 1469 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC006946.1-201ENST00000429106 328 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AL358232.1-201ENST00000448030 501 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 CCDC75P1-201ENST00000469247 791 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC026403.1-201ENST00000518938 295 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC025627.2-201ENST00000576220 160 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 CR392039.5-201ENST00000623201 510 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 RPL21P17-201ENST00000397467 475 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 PTMAP2-201ENST00000397627 327 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AC068533.1-201ENST00000418542 415 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AL035246.1-201ENST00000433554 1255 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 RPS3AP46-201ENST00000448352 682 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 CCDC58P3-201ENST00000590792 430 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AC112230.1-201ENST00000604342 547 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 RNU1-30P-201ENST00000606575 163 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AL669942.2-201ENST00000620352 697 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AC004777.1-201ENST00000624317 287 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 AC139713.2-215ENST00000641428 5037 ntBASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KIAA1549Q9HCM3 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 MIR199A2-201ENST00000385289 110 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 RPL37P1-201ENST00000432310 284 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 ATP5HP2-201ENST00000433885 485 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 Z74696.2-201ENST00000436514 498 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 MIR708-201ENST00000390708 88 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL160275.2-201ENST00000412010 394 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 TRIM60P17-201ENST00000415181 719 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL451062.2-201ENST00000427515 271 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 YME1L1P1-201ENST00000429435 297 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC069285.2-201ENST00000440210 275 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC018635.1-201ENST00000468292 1030 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL139395.1-201ENST00000603662 160 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AL645927.2-201ENST00000618350 349 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 AC132825.8-201ENST00000640783 297 ntBASIC3.47□□□□□ -1.85
KIAA1549Q9HCM3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
KIAA1549Q9HCM3 AC006971.1-201ENST00000407916 4486 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 IPO8P1-201ENST00000455509 3109 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 SNORA62.3-201ENST00000365110 153 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC091286.1-201ENST00000431233 461 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms