Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL590290.1-201ENST00000405336 380 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC074085.1-201ENST00000413598 418 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC002504.1-201ENST00000438281 691 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 LSM1P1-201ENST00000438629 273 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 MTCO3P45-201ENST00000443036 613 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 MTCO1P27-201ENST00000448269 226 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 RNU7-63P-201ENST00000459054 62 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 PFN1P6-201ENST00000476786 399 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC013356.1-201ENST00000489027 564 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC106872.3-201ENST00000495104 446 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC093870.1-201ENST00000506837 213 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC022296.2-201ENST00000512424 202 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 CDH12P4-201ENST00000517835 295 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 CDH12P3-201ENST00000517935 295 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 CDH12P1-201ENST00000518435 295 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 MIR3167-201ENST00000579623 85 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AL683813.2-201ENST00000605245 502 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 RNU6-84P-201ENST00000607737 102 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC091953.5-201ENST00000622919 233 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 AL391262.1-201ENST00000556558 1992 ntBASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNTNAP3Q9BZ76 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AC107021.2-201ENST00000567714 2095 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AP004289.2-201ENST00000444413 1457 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RN7SKP103-201ENST00000363848 320 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 Y_RNA.252-201ENST00000364556 101 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RNU6-1040P-201ENST00000383974 107 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RNY1P14-201ENST00000384426 108 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 Y_RNA.645-201ENST00000391229 102 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AL445529.1-201ENST00000398713 389 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RPS20P2-201ENST00000402520 389 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RPL37P18-201ENST00000411602 243 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RPL37P10-201ENST00000412884 288 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AL807761.1-201ENST00000417622 171 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 SLC35E1P1-201ENST00000419313 864 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RPL21P91-201ENST00000429231 479 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 HMGB3P10-201ENST00000434734 572 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 PTMAP6-201ENST00000439110 327 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AL590664.1-201ENST00000448065 339 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AC013470.1-201ENST00000453438 462 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AC091153.1-201ENST00000466297 402 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AC083904.1-201ENST00000487828 231 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RNU6-138P-201ENST00000515952 107 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 SCARNA20.1-201ENST00000516009 138 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RNA5SP271-201ENST00000516700 88 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 RNU6-182P-201ENST00000516970 105 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AP003072.2-201ENST00000527756 676 ntBASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.5□□□□□ -1.37
CNTNAP3Q9BZ76 AP002373.2-201ENST00000541631 1060 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms