Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NDUFA5P11-201ENST00000567995 343 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 MIR4789-201ENST00000577469 82 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 KPNA2P3-201ENST00000584190 848 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AC012254.4-201ENST00000588843 273 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 DYNLL1P1-201ENST00000595442 269 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AC073410.2-201ENST00000603240 332 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AC092447.9-201ENST00000603395 144 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AC068802.1-201ENST00000603420 732 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 NDUFB9P1-201ENST00000604683 510 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 RAC1P9-201ENST00000604990 392 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AC007619.2-201ENST00000605743 379 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 SNORD58B-201ENST00000607313 66 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 BX664608.1-201ENST00000610519 487 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AL354718.1-201ENST00000619764 589 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AL450226.2-201ENST00000622913 439 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AL732372.2-225ENST00000642124 456 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 THAP12P3-201ENST00000456373 2266 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 AC015871.3-201ENST00000618835 2261 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 EEF1A1P9-201ENST00000514975 1383 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 PABPC1P7-201ENST00000413177 1513 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 TMC3-AS1-206ENST00000612811 2726 ntBASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-3Q9BYR4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 AC107081.3-201ENST00000612715 2034 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 AC093278.2-201ENST00000564956 2485 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 PPIAP24-201ENST00000328558 471 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 OR10D1P-201ENST00000355343 936 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 AL121886.1-201ENST00000358609 435 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RPL32P3-201ENST00000359025 275 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RN7SKP184-201ENST00000362348 333 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 Y_RNA.100-201ENST00000363141 102 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RN7SKP162-201ENST00000363605 345 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 Y_RNA.215-201ENST00000364204 112 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 Y_RNA.237-201ENST00000364439 102 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 SNORA70.3-201ENST00000365075 132 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-142P-201ENST00000384019 107 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 SNORA75B-201ENST00000384053 137 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 Y_RNA.428-201ENST00000384078 102 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 U6.112-201ENST00000384129 70 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-36P-201ENST00000384172 107 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-1144P-201ENST00000384247 104 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-95P-201ENST00000384697 107 ntBASIC2.3□□□□□ -2.04
KRTAP4-3Q9BYR4 AC245036.1-201ENST00000391727 309 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms