Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.24□□□□□ -1.41
IFT140Q96RY7 AC097505.1-201ENST00000610199 565 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 AC119674.1-212ENST00000641155 993 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.24□□□□□ -1.41
IFT140Q96RY7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
IFT140Q96RY7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.24□□□□□ -1.41
IFT140Q96RY7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
IFT140Q96RY7 RPL23AP57-201ENST00000332361 466 ntBASIC6.23□□□□□ -1.41
IFT140Q96RY7 HSFY4P-201ENST00000415994 1181 ntBASIC6.23□□□□□ -1.41
IFT140Q96RY7 AC073335.1-201ENST00000427776 363 ntBASIC6.23□□□□□ -1.41
IFT140Q96RY7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 NPM1P28-201ENST00000492269 840 ntBASIC6.23□□□□□ -1.41
IFT140Q96RY7 RPL5P23-201ENST00000496040 868 ntBASIC6.23□□□□□ -1.41
IFT140Q96RY7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 MIR5186-201ENST00000577504 120 ntBASIC6.23□□□□□ -1.41
IFT140Q96RY7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
IFT140Q96RY7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
IFT140Q96RY7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
IFT140Q96RY7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
IFT140Q96RY7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
IFT140Q96RY7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.23□□□□□ -1.41
IFT140Q96RY7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
IFT140Q96RY7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 OR10J6P-201ENST00000289731 930 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 RPL23AP12-201ENST00000467573 473 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 AC097462.2-201ENST00000504623 481 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 OR7E13P-201ENST00000526052 910 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
IFT140Q96RY7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
IFT140Q96RY7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
IFT140Q96RY7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
IFT140Q96RY7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
IFT140Q96RY7 AC000374.1-201ENST00000434698 1745 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 RNU4-35P-201ENST00000362588 141 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
IFT140Q96RY7 AC063952.1-203ENST00000634410 658 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 AP000553.6-201ENST00000641242 118 ntBASIC6.22□□□□□ -1.41
IFT140Q96RY7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
IFT140Q96RY7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
IFT140Q96RY7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.21□□□□□ -1.42
IFT140Q96RY7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
IFT140Q96RY7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
IFT140Q96RY7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
IFT140Q96RY7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 U3.19-201ENST00000390893 196 ntBASIC6.21□□□□□ -1.42
IFT140Q96RY7 AC093719.1-202ENST00000392735 373 ntBASIC6.21□□□□□ -1.42
IFT140Q96RY7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 AC006517.1-201ENST00000480485 328 ntBASIC6.21□□□□□ -1.42
IFT140Q96RY7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 AC073522.1-201ENST00000483312 377 ntBASIC6.21□□□□□ -1.42
IFT140Q96RY7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.21□□□□□ -1.42
IFT140Q96RY7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
IFT140Q96RY7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
IFT140Q96RY7 AC083843.3-201ENST00000623679 2186 ntBASIC6.2□□□□□ -1.42
IFT140Q96RY7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 IGKV2-38-201ENST00000517443 247 ntBASIC6.2□□□□□ -1.42
IFT140Q96RY7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.2□□□□□ -1.42
IFT140Q96RY7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
IFT140Q96RY7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
IFT140Q96RY7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
IFT140Q96RY7 RN7SKP284-201ENST00000411002 343 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms