Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 BX248409.1-201ENST00000455497 255 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 CDC42P1-201ENST00000456658 548 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 RPS26P3-201ENST00000470205 348 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC073522.1-201ENST00000483312 377 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC090543.2-201ENST00000483963 348 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC011037.1-201ENST00000483964 558 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC004057.1-201ENST00000485827 348 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC093801.2-201ENST00000503966 1050 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC026414.1-201ENST00000504046 698 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC008885.2-201ENST00000509506 930 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 MORF4L1P3-201ENST00000525966 950 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC124293.1-201ENST00000530034 493 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 CBX3P5-201ENST00000552017 521 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AL352979.3-201ENST00000553515 247 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AL355816.2-201ENST00000610049 647 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC009163.6-201ENST00000612367 342 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AL355852.1-201ENST00000454081 1771 ntBASIC4.09□□□□□ -1.76
RFT1Q96AA3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RFT1Q96AA3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
RFT1Q96AA3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.09□□□□□ -1.76
RFT1Q96AA3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RFT1Q96AA3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RFT1Q96AA3 AC011266.1-201ENST00000624119 3569 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFT1Q96AA3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFT1Q96AA3 U8.4-201ENST00000363626 134 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFT1Q96AA3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 HNRNPDP2-201ENST00000406475 478 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 RNU6-77P-201ENST00000410554 91 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC093162.1-201ENST00000419682 124 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFT1Q96AA3 ELOCP6-201ENST00000429066 328 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 SKP1P3-201ENST00000429280 487 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 RPL7P4-203ENST00000430239 730 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 FTH1P6-201ENST00000430768 320 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 RPS26P40-201ENST00000435209 294 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 RPL7P11-201ENST00000437586 658 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AL353748.1-201ENST00000440753 474 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 RPS27AP15-201ENST00000447672 466 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC008280.2-201ENST00000455473 307 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 ELOCP12-201ENST00000458706 328 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC015724.1-201ENST00000478577 156 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC126121.1-201ENST00000482313 553 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC146944.2-203ENST00000502493 354 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 HPRT1P2-201ENST00000505250 544 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC139495.1-202ENST00000513164 354 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 RNA5SP446-201ENST00000515955 82 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 IGHV3-32-201ENST00000519182 355 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 HMGB1P1-201ENST00000522557 636 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC087894.1-201ENST00000538359 518 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC133555.2-201ENST00000550213 292 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC068620.3-201ENST00000602749 560 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC069304.3-201ENST00000603938 1084 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AL392112.1-201ENST00000605115 829 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC010857.1-201ENST00000606398 594 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AC068254.2-201ENST00000623938 3577 ntBASIC4.08□□□□□ -1.76
RFT1Q96AA3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFT1Q96AA3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
RFT1Q96AA3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.07□□□□□ -1.76
RFT1Q96AA3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFT1Q96AA3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.07□□□□□ -1.76
RFT1Q96AA3 AL590763.1-201ENST00000398297 1545 ntBASIC4.07□□□□□ -1.76
RFT1Q96AA3 MTCO1P11-201ENST00000429111 1528 ntBASIC4.07□□□□□ -1.76
RFT1Q96AA3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
RFT1Q96AA3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.07□□□□□ -1.76
RFT1Q96AA3 RNU5B-4P-201ENST00000363508 111 ntBASIC4.07□□□□□ -1.76
RFT1Q96AA3 RNU4-4P-201ENST00000364588 130 ntBASIC4.07□□□□□ -1.76
RFT1Q96AA3 U6.112-201ENST00000384129 70 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms