Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC025918.2-201ENST00000558683 763 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 MTND4LP25-201ENST00000570218 163 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC011472.4-201ENST00000615848 491 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC245389.2-201ENST00000616023 576 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC242843.1-201ENST00000618702 573 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AL669942.2-201ENST00000620352 697 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 MIR8059-201ENST00000620427 81 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 MIR4727-201ENST00000622232 55 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC097372.4-201ENST00000625025 466 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 FRG1DP-201ENST00000635586 771 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC012020.1-201ENST00000624541 1728 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC009951.1-201ENST00000623674 2614 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 OR6K3-202ENST00000368146 996 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 MIR1179-201ENST00000408703 91 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 RN7SKP182-201ENST00000410772 298 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 GSTM3P2-201ENST00000412746 530 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AL353748.1-201ENST00000440753 474 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 HMGB1P26-201ENST00000452520 628 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 RNU7-27P-201ENST00000459281 62 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 SNORA31.9-201ENST00000516429 84 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 VTA1P2-201ENST00000520205 911 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 IGLV3-26-201ENST00000520756 302 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC105233.3-201ENST00000531125 744 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AL121834.1-201ENST00000572284 509 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AL158211.2-201ENST00000607282 395 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AP000720.1-201ENST00000625091 483 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 AL133243.3-201ENST00000617415 3004 ntBASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf40Q8IXQ3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
C9orf40Q8IXQ3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
C9orf40Q8IXQ3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
C9orf40Q8IXQ3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
C9orf40Q8IXQ3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
C9orf40Q8IXQ3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
C9orf40Q8IXQ3 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 RNU4-31P-201ENST00000384211 141 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 PTGES3P2-201ENST00000407942 482 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC010385.1-201ENST00000412374 256 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 TATDN1P1-201ENST00000414123 891 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 RPS23P10-201ENST00000416185 486 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC091390.1-201ENST00000433904 331 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 PPIAP21-201ENST00000464473 501 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 RWDD4P1-201ENST00000488019 565 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AF213884.1-201ENST00000488102 463 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 BNIP3P41-201ENST00000503774 571 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 AC099522.1-202ENST00000514718 367 ntBASIC3.9□□□□□ -1.79
C9orf40Q8IXQ3 RN7SKP141-201ENST00000516167 338 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms