Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC079753.1-201ENST00000623243 3868 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC011416.1-201ENST00000514947 1732 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 MTCO1P14-201ENST00000441695 1559 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 LINC00622-201ENST00000562811 1570 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 GCNT1P4-201ENST00000404096 329 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RN7SKP240-201ENST00000410583 375 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RNU6-1148P-201ENST00000410992 104 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 MTND3P8-201ENST00000412909 339 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC062016.2-201ENST00000420950 676 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 GAPDHP49-201ENST00000421421 961 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC007559.1-201ENST00000428736 355 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AL606490.1-201ENST00000452266 765 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 MTND4P17-201ENST00000470444 350 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RPL7P39-201ENST00000481157 744 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RN7SL362P-201ENST00000494228 267 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC005741.1-201ENST00000511094 432 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC087241.2-201ENST00000535801 324 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 NANOGNBP2-201ENST00000544753 553 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SUB1P2-201ENST00000556401 297 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC090236.2-201ENST00000587933 1101 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC008555.7-201ENST00000605008 583 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC080078.3-201ENST00000605407 463 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AL451049.1-201ENST00000608672 497 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AL352984.2-201ENST00000611153 546 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AP003789.1-201ENST00000617737 605 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 MKKS-204ENST00000639674 192 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 AL121768.1-201ENST00000613917 2544 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 SNX18P3-202ENST00000565670 1750 ntBASIC5.6□□□□□ -1.51
ATG4DQ86TL0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL355377.1-201ENST00000621125 1653 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 MTCO1P12-201ENST00000414273 1543 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL662795.2-201ENST00000624252 3706 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC092724.1-201ENST00000624623 3397 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 TTC41P-205ENST00000551270 3963 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC010329.1-201ENST00000593903 8328 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 OR5J1P-201ENST00000313544 939 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 GAPDHP24-201ENST00000328713 983 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AC067945.1-201ENST00000342609 618 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 Y_RNA.31-201ENST00000362574 102 ntBASIC5.59□□□□□ -1.51
ATG4DQ86TL0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ATG4DQ86TL0 AL121835.1-201ENST00000404250 354 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms