Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RN7SKP177-201ENST00000410567 355 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 RBMY2KP-201ENST00000418221 992 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 RPL36AP10-201ENST00000421785 322 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 PTP4A1P7-201ENST00000423476 514 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 RPL34P6-201ENST00000432390 345 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 ARF4P4-201ENST00000439608 520 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC092170.1-201ENST00000440211 356 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 Z95152.1-201ENST00000453556 656 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 MTATP6P14-201ENST00000455189 673 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC146507.1-201ENST00000468335 354 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC083982.1-201ENST00000485679 344 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC104971.1-201ENST00000495117 578 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 CAB39P1-201ENST00000502277 460 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC008565.1-201ENST00000509046 885 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 UBE2FP2-201ENST00000566646 462 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 MIR4789-201ENST00000577469 82 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 RN7SL802P-201ENST00000577858 299 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 MIR4480-201ENST00000582492 71 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 OR1AB1P-201ENST00000585564 761 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC103792.1-201ENST00000603591 919 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC011458.1-201ENST00000604034 617 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AL158050.2-201ENST00000605336 568 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AP002802.2-201ENST00000605877 235 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 FAM25E-202ENST00000608562 189 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC022106.2-201ENST00000620114 757 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AP001784.1-201ENST00000624107 428 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AL356118.1-201ENST00000635272 1078 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 MIR4496-201ENST00000635896 61 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 FAM157B-203ENST00000639350 358 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 NMD3P1-201ENST00000439704 1488 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC053481.2-202ENST00000582394 1500 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 RNA5SP87-201ENST00000384155 118 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC092832.1-201ENST00000422934 400 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC011242.1-201ENST00000433596 1158 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 FABP5P3-201ENST00000437960 408 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC000041.1-201ENST00000439655 175 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 RPS26P2-201ENST00000440331 348 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC010733.1-201ENST00000451515 401 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC009963.2-201ENST00000453431 138 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC092905.1-201ENST00000467527 949 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 RPS4XP6-201ENST00000477670 797 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC008427.1-201ENST00000503102 655 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 SNX5P1-201ENST00000505757 1041 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC069306.1-201ENST00000507006 843 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC104108.1-201ENST00000509930 412 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms