Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FAM78BQ5VT40 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FAM78BQ5VT40 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
FAM78BQ5VT40 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
FAM78BQ5VT40 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
FAM78BQ5VT40 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FAM78BQ5VT40 DHX40P1-201ENST00000588725 1412 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 NCAPGP1-201ENST00000505112 1814 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 RNA5SP167-201ENST00000365461 116 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 RNU6-532P-201ENST00000384318 107 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 SNORA37-201ENST00000384504 129 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 TRGV6-201ENST00000417928 299 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC115285.1-201ENST00000424879 736 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 MTCO1P54-201ENST00000430139 712 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AL365396.1-201ENST00000430854 671 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 MTCO1P52-201ENST00000433928 531 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AL136097.1-201ENST00000456945 913 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 RPL31P53-201ENST00000457065 348 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 RPL21P126-201ENST00000470049 478 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 RPS29P19-201ENST00000479709 171 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC092451.1-201ENST00000480211 153 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 RPL23AP72-201ENST00000492447 435 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 IGKV2-23-201ENST00000518729 323 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 BMS1P7-201ENST00000602440 1052 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC007687.1-201ENST00000602704 304 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AL354984.3-201ENST00000604803 325 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC095038.2-201ENST00000621464 1070 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC025125.1-201ENST00000624743 1922 ntBASIC3.28□□□□□ -1.88
FAM78BQ5VT40 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
FAM78BQ5VT40 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC008033.1-201ENST00000216407 1162 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RNU1-130P-201ENST00000363930 160 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 SNORD65-201ENST00000391079 73 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC136624.1-201ENST00000400791 413 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RHEBP3-201ENST00000411920 351 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC119751.6-201ENST00000416712 186 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RBMY2KP-201ENST00000418221 992 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RPA2P2-201ENST00000419698 796 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC069213.2-201ENST00000420238 366 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC011742.1-201ENST00000431448 434 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AL138799.3-201ENST00000438968 350 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AL157884.3-201ENST00000448273 1184 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RPL23AP81-201ENST00000455252 467 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 DHFRP3-201ENST00000455595 559 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 CFTRP1-201ENST00000456646 183 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RNU7-170P-201ENST00000459303 61 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 RPL7L1P8-201ENST00000469911 741 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC005798.1-201ENST00000513715 387 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC084783.1-201ENST00000565846 910 ntBASIC3.27□□□□□ -1.89
FAM78BQ5VT40 AC067852.4-201ENST00000590314 478 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms