Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC025518.1-201ENST00000479856 347 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 DEFB109D-201ENST00000529497 240 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC107993.1-201ENST00000591343 684 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AL583832.1-201ENST00000603227 784 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 SEPT7P8-201ENST00000413308 775 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 DBIP2-201ENST00000419076 262 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC098799.1-201ENST00000504752 800 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 CR383656.14-201ENST00000551951 406 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC026979.4-201ENST00000606555 645 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 RPS3AP14-201ENST00000483907 780 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC080014.1-201ENST00000496877 1201 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC118465.1-201ENST00000513820 1271 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 OSBPL9P1-201ENST00000604744 1469 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 LINC01109-201ENST00000603837 3081 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC021146.3-201ENST00000511911 260 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 UBE2NP1-201ENST00000545592 458 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AL121603.1-201ENST00000553815 142 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 SNORA62.6-201ENST00000606322 83 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 HSPD1P11-201ENST00000508643 1702 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC073073.2-201ENST00000609827 2578 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 U3.26-201ENST00000391236 204 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC005008.1-201ENST00000456151 612 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC026333.2-201ENST00000542164 106 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AL158071.1-201ENST00000430315 461 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 AC103843.2-201ENST00000530523 682 ntBASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS13DQ5THJ4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
VPS13DQ5THJ4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
VPS13DQ5THJ4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 Z95327.2-201ENST00000414579 1873 ntBASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 IL6-203ENST00000401651 539 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 AC008885.1-201ENST00000514930 301 ntBASIC2.46□□□□□ -2.02
VPS13DQ5THJ4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms