Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC079741.1-201ENST00000321498 212 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 RN7SKP113-201ENST00000363891 295 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 Y_RNA.192-201ENST00000363977 102 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 RN7SKP114-201ENST00000410327 279 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC119751.6-201ENST00000416712 186 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 DYNLL1P7-201ENST00000429273 258 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC068287.1-201ENST00000430283 295 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 RPL21P110-201ENST00000433345 446 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 RPL34P20-201ENST00000442771 351 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC104306.1-201ENST00000449702 371 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL513533.1-201ENST00000453728 415 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 ATG12P2-201ENST00000456830 416 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC079168.1-201ENST00000458741 345 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC063943.1-201ENST00000465434 453 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 RN7SL354P-201ENST00000469282 294 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC005912.1-201ENST00000495392 255 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 COX6B1P5-201ENST00000509843 249 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC008837.2-201ENST00000513076 418 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL117351.2-201ENST00000513571 157 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 RNU6-347P-201ENST00000516658 105 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 UBE2FP2-201ENST00000566646 462 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 MIR4666A-201ENST00000580160 79 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC124856.1-201ENST00000600819 896 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 MIR6780A-201ENST00000615089 68 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 MIR7703-201ENST00000620784 77 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 MIR1322-201ENST00000638013 71 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 MFSD8-216ENST00000641147 4009 ntBASIC5.32□□□□□ -1.56
SLC44A4Q53GD3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 MTND4P4-201ENST00000439033 1366 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 RNA5SP505-201ENST00000364748 108 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 Y_RNA.436-201ENST00000384097 102 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 Y_RNA.465-201ENST00000384293 102 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 SNORD56.6-201ENST00000384569 71 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL031779.1-201ENST00000415663 330 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 GTF2IP7-202ENST00000436677 309 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AL359265.1-201ENST00000440296 795 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC073465.2-201ENST00000440938 498 ntBASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC44A4Q53GD3 AC073264.2-201ENST00000448886 166 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms