Protein–RNA interactions for Protein: Q16586

SGCA, Alpha-sarcoglycan, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCAQ16586 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SGCAQ16586 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SGCAQ16586 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 SNORD66.1-201ENST00000391230 76 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 NPM1P10-201ENST00000398310 865 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 RPS23P10-201ENST00000416185 486 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AL161631.1-201ENST00000417933 486 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AL139095.3-201ENST00000419672 1203 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 RPA2P2-201ENST00000419698 796 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AL159169.1-201ENST00000421119 127 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 MTCO1P54-201ENST00000430139 712 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 HLA-N-201ENST00000437516 135 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCAQ16586 AP002345.1-201ENST00000456493 928 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 RPL7P32-201ENST00000457119 744 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCAQ16586 RPS27AP16-201ENST00000492222 470 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC012170.1-201ENST00000495139 359 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 AC139783.2-201ENST00000504847 1145 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 SNX5P1-201ENST00000505757 1041 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCAQ16586 AC021146.7-201ENST00000509604 775 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCAQ16586 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCAQ16586 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCAQ16586 AC012414.2-201ENST00000559474 187 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCAQ16586 MIMT1-201ENST00000597105 1050 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC005229.3-201ENST00000603438 323 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AP004372.1-201ENST00000604842 844 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC090948.1-201ENST00000607464 549 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC103710.3-201ENST00000608157 948 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 AC019278.1-201ENST00000623516 479 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 LINC00216-201ENST00000623548 1126 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 RPL23AP61-201ENST00000623642 466 ntBASIC3.82□□□□□ -1.8
SGCAQ16586 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCAQ16586 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCAQ16586 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCAQ16586 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SGCAQ16586 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCAQ16586 AC138393.1-206ENST00000540997 1886 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.81□□□□□ -1.8
SGCAQ16586 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 IGKV7-3-201ENST00000357453 298 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 RNA5SP447-201ENST00000363749 119 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 AL034374.1-201ENST00000406329 351 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 SNORA11F-201ENST00000408237 128 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 RPL37P18-201ENST00000411602 243 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 BTF3P9-201ENST00000418784 283 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 AC092832.1-201ENST00000422934 400 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 HMGB3P5-201ENST00000428894 612 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 PRELID3BP10-201ENST00000431957 584 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 TRIM60P13-201ENST00000432350 1283 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 RN7SL738P-201ENST00000470264 297 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 RPS29P22-201ENST00000472363 168 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 TMED11P-201ENST00000479478 690 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AP001086.1-201ENST00000494882 321 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 AC010374.1-201ENST00000503762 1237 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AC010627.1-201ENST00000503819 1294 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.81□□□□□ -1.8
SGCAQ16586 HMGB1P47-201ENST00000511281 589 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 RNU6-760P-201ENST00000516078 97 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 IFITM8P-201ENST00000522529 394 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 AC141257.3-201ENST00000572906 215 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 MIR4715-201ENST00000584117 79 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCAQ16586 AC113403.1-201ENST00000604910 193 ntBASIC3.81□□□□□ -1.8
SGCAQ16586 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SGCAQ16586 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.81□□□□□ -1.8
SGCAQ16586 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCAQ16586 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCAQ16586 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms