Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL732292.1-201ENST00000426692 226 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 RPP40P1-201ENST00000426762 456 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 OR52B5P-201ENST00000435337 951 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AL645931.1-201ENST00000439737 410 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC245047.2-201ENST00000441060 530 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 RPL7P59-201ENST00000447700 943 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC092647.2-201ENST00000452998 253 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC009963.2-201ENST00000453431 138 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 NF1P3-201ENST00000457709 450 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AP000893.1-201ENST00000474462 794 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 RN7SL244P-201ENST00000493405 297 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 PRELID3BP7-201ENST00000503606 469 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC083829.1-201ENST00000503756 657 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC011352.3-201ENST00000505162 593 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC106872.4-201ENST00000510050 523 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN1BQ07699 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN1BQ07699 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN1BQ07699 VN1R87P-201ENST00000596706 487 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC008638.3-201ENST00000603341 463 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 IMMP1LP3-201ENST00000604197 224 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AL049794.2-201ENST00000616301 365 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC090527.3-201ENST00000619041 548 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AP003476.1-201ENST00000623984 516 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC068620.4-201ENST00000636730 1182 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 MIR4302-201ENST00000638058 60 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCN1BQ07699 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SCN1BQ07699 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SCN1BQ07699 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
SCN1BQ07699 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SCN1BQ07699 AL592182.3-201ENST00000642132 3304 ntBASIC4.21□□□□□ -1.73
SCN1BQ07699 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SCN1BQ07699 OR56B2P-201ENST00000317102 954 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 U3.2-201ENST00000362981 210 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RNA5SP455-201ENST00000365190 119 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RHOT1P2-201ENST00000366423 333 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN1BQ07699 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN1BQ07699 MIR223-201ENST00000385204 110 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 FABP12P1-201ENST00000401911 322 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 GSTA8P-201ENST00000404253 637 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 MIR1286-201ENST00000408112 78 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 SNORA77-201ENST00000408716 125 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 CHEK2P5-201ENST00000423877 246 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN1BQ07699 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN1BQ07699 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN1BQ07699 MTCYBP15-201ENST00000433123 1127 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RPS29P9-201ENST00000440360 171 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RPS27AP15-201ENST00000447672 466 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC104306.1-201ENST00000449702 371 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 TCEA1P1-201ENST00000449716 880 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 FAR2P1-206ENST00000449736 709 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN1BQ07699 RPL7P32-201ENST00000457119 744 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RN7SL172P-201ENST00000460535 303 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 HMGN2P25-201ENST00000486956 268 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RN7SL30P-201ENST00000488416 306 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RN7SL101P-201ENST00000496350 279 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC072052.1-201ENST00000496556 306 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN1BQ07699 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN1BQ07699 AC118282.2-201ENST00000508739 374 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC109471.1-201ENST00000511631 612 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN1BQ07699 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.21□□□□□ -1.74
SCN1BQ07699 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN1BQ07699 RN7SL802P-201ENST00000577858 299 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN1BQ07699 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.21□□□□□ -1.74
SCN1BQ07699 ELOCP28-201ENST00000590044 317 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC011492.1-201ENST00000600023 315 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 RPL7P50-201ENST00000600588 727 ntBASIC4.21□□□□□ -1.74
SCN1BQ07699 AC105227.2-201ENST00000615075 605 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms