Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-1200P-201ENST00000384162 107 ntBASIC4.74□□□□□ -1.65
RAE1P78406 RNU6-1300P-201ENST00000391046 108 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AL139098.1-201ENST00000407291 389 ntBASIC4.74□□□□□ -1.65
RAE1P78406 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 AC002524.1-201ENST00000411687 547 ntBASIC4.74□□□□□ -1.65
RAE1P78406 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.74□□□□□ -1.65
RAE1P78406 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 DDX39BP1-205ENST00000422507 192 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AL022400.1-201ENST00000423946 935 ntBASIC4.74□□□□□ -1.65
RAE1P78406 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 AC005033.1-201ENST00000428904 813 ntBASIC4.74□□□□□ -1.65
RAE1P78406 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.74□□□□□ -1.65
RAE1P78406 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 ELOCP8-201ENST00000439309 332 ntBASIC4.74□□□□□ -1.65
RAE1P78406 ELOCP15-201ENST00000442090 332 ntBASIC4.74□□□□□ -1.65
RAE1P78406 RPS27AP15-201ENST00000447672 466 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 AL445669.2-201ENST00000454425 421 ntBASIC4.74□□□□□ -1.65
RAE1P78406 RPS26P39-201ENST00000469206 341 ntBASIC4.74□□□□□ -1.65
RAE1P78406 CCDC75P1-201ENST00000469247 791 ntBASIC4.74□□□□□ -1.65
RAE1P78406 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 AC008494.2-201ENST00000514544 370 ntBASIC4.74□□□□□ -1.65
RAE1P78406 Y_RNA.655-201ENST00000515919 96 ntBASIC4.74□□□□□ -1.65
RAE1P78406 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.74□□□□□ -1.65
RAE1P78406 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 HIGD1AP6-201ENST00000521833 279 ntBASIC4.74□□□□□ -1.65
RAE1P78406 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.74□□□□□ -1.65
RAE1P78406 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 MIR1269B-201ENST00000580405 75 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.74□□□□□ -1.65
RAE1P78406 AC011447.4-201ENST00000587562 111 ntBASIC4.74□□□□□ -1.65
RAE1P78406 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 AL451086.1-201ENST00000605596 223 ntBASIC4.74□□□□□ -1.65
RAE1P78406 OR2AS2P-201ENST00000606902 342 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 AC073348.1-201ENST00000623002 331 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AF246928.1-201ENST00000623768 87 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AP003072.4-201ENST00000624580 310 ntBASIC4.74□□□□□ -1.65
RAE1P78406 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 AC093775.1-201ENST00000624154 1868 ntBASIC4.74□□□□□ -1.65
RAE1P78406 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 CASC19-204ENST00000641001 2055 ntBASIC4.74□□□□□ -1.65
RAE1P78406 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.74□□□□□ -1.65
RAE1P78406 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RAE1P78406 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 Y_RNA.408-201ENST00000383987 102 ntBASIC4.73□□□□□ -1.65
RAE1P78406 RNU6-1151P-201ENST00000384684 107 ntBASIC4.73□□□□□ -1.65
RAE1P78406 SNORA66-201ENST00000384792 133 ntBASIC4.73□□□□□ -1.65
RAE1P78406 SNORA11.3-201ENST00000408471 128 ntBASIC4.73□□□□□ -1.65
RAE1P78406 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 AC234782.4-201ENST00000417646 1048 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.73□□□□□ -1.65
RAE1P78406 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RAE1P78406 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 AL050321.1-201ENST00000432363 400 ntBASIC4.73□□□□□ -1.65
RAE1P78406 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.73□□□□□ -1.65
RAE1P78406 AC073648.4-201ENST00000442655 781 ntBASIC4.73□□□□□ -1.65
RAE1P78406 OR7E125P-201ENST00000443450 846 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 RPL7P59-201ENST00000447700 943 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC016724.1-201ENST00000453215 421 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 RPL37P3-201ENST00000456825 293 ntBASIC4.73□□□□□ -1.65
RAE1P78406 MTND4LP3-201ENST00000468320 276 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.73□□□□□ -1.65
RAE1P78406 RN7SL30P-201ENST00000488416 306 ntBASIC4.73□□□□□ -1.65
RAE1P78406 HIGD1AP14-201ENST00000507617 282 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC109471.1-201ENST00000511631 612 ntBASIC4.73□□□□□ -1.65
RAE1P78406 RN7SKP31-201ENST00000516354 278 ntBASIC4.73□□□□□ -1.65
RAE1P78406 RNU6-885P-201ENST00000516607 104 ntBASIC4.73□□□□□ -1.65
RAE1P78406 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.73□□□□□ -1.65
RAE1P78406 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.73□□□□□ -1.65
RAE1P78406 AC027308.1-201ENST00000517993 110 ntBASIC4.73□□□□□ -1.65
RAE1P78406 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms