Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 BTF3P10-201ENST00000433415 495 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 RPS3AP38-201ENST00000435889 763 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 RPS4XP4-201ENST00000443195 763 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 RPL17P49-201ENST00000443728 411 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AL359955.2-201ENST00000445380 353 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AP000542.1-201ENST00000448473 371 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 HLA-DPA3-207ENST00000454398 229 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC087879.1-201ENST00000474343 374 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 RPL23AP40-201ENST00000487630 390 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AP001025.2-201ENST00000490908 477 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 RPL15P21-201ENST00000495592 567 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 AC117522.1-201ENST00000509821 380 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC105914.1-201ENST00000511798 226 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 RPS27AP18-201ENST00000515536 459 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 RNU2-46P-201ENST00000517038 113 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.42□□□□□ -1.54
GFRA1P56159 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.42□□□□□ -1.54
GFRA1P56159 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 AP001646.1-201ENST00000527936 915 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 TRIM51DP-201ENST00000529746 596 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.42□□□□□ -1.54
GFRA1P56159 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.42□□□□□ -1.54
GFRA1P56159 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 NF1P5-201ENST00000588287 448 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC123786.2-201ENST00000603459 275 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 AC008277.2-201ENST00000605196 797 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 COX6CP4-201ENST00000605798 228 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC015982.1-201ENST00000608113 465 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 AC104985.2-201ENST00000620598 500 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 LRRC77P-213ENST00000637727 880 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 CASC19-264ENST00000641912 1184 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
GFRA1P56159 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 CCT4P2-201ENST00000233836 1548 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AP000473.2-201ENST00000602659 1537 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.42□□□□□ -1.54
GFRA1P56159 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA1P56159 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
GFRA1P56159 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA1P56159 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA1P56159 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC009779.8-201ENST00000641684 4384 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 HSPA8P18-201ENST00000439846 1928 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
GFRA1P56159 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
GFRA1P56159 TMSB4XP4-201ENST00000323496 618 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.41□□□□□ -1.54
GFRA1P56159 HSPD1P16-201ENST00000402302 394 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 RPS20P2-201ENST00000402520 389 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 RNU6-195P-201ENST00000411352 109 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AL354890.1-201ENST00000413730 346 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 RPS17P17-201ENST00000419392 409 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC234779.1-201ENST00000425910 285 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA1P56159 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA1P56159 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 SBDSP1-204ENST00000453858 737 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA1P56159 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA1P56159 RBM43P1-201ENST00000476891 1081 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 RPS3AP14-201ENST00000483907 780 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 RPL17P2-201ENST00000491913 451 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AC034222.1-201ENST00000494052 532 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AC005726.1-201ENST00000494679 427 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA1P56159 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC098799.2-201ENST00000509466 868 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA1P56159 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA1P56159 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.41□□□□□ -1.54
GFRA1P56159 Y_RNA.672-201ENST00000516289 104 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 RNA5SP271-201ENST00000516700 88 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms