Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 C4BPAP2-201ENST00000428434 478 ntBASIC3.95□□□□□ -1.78
LIM2P55344 ELOCP18-201ENST00000434209 337 ntBASIC3.95□□□□□ -1.78
LIM2P55344 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.95□□□□□ -1.78
LIM2P55344 AC092013.1-201ENST00000438795 332 ntBASIC3.95□□□□□ -1.78
LIM2P55344 ELOCP8-201ENST00000439309 332 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AL353748.1-201ENST00000440753 474 ntBASIC3.95□□□□□ -1.78
LIM2P55344 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 ELOCP15-201ENST00000442090 332 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.95□□□□□ -1.78
LIM2P55344 RNA5SP246-201ENST00000458909 119 ntBASIC3.95□□□□□ -1.78
LIM2P55344 RNU6-1218P-201ENST00000458990 108 ntBASIC3.95□□□□□ -1.78
LIM2P55344 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.95□□□□□ -1.78
LIM2P55344 AC010618.1-201ENST00000469924 477 ntBASIC3.95□□□□□ -1.78
LIM2P55344 RN7SL585P-201ENST00000470538 280 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AC017037.1-201ENST00000508460 471 ntBASIC3.95□□□□□ -1.78
LIM2P55344 RN7SKP141-201ENST00000516167 338 ntBASIC3.95□□□□□ -1.78
LIM2P55344 SNORA76.2-201ENST00000517095 137 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.95□□□□□ -1.78
LIM2P55344 UBTFL9-201ENST00000534504 1148 ntBASIC3.95□□□□□ -1.78
LIM2P55344 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.95□□□□□ -1.78
LIM2P55344 AC063950.1-201ENST00000552036 308 ntBASIC3.95□□□□□ -1.78
LIM2P55344 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.95□□□□□ -1.78
LIM2P55344 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.95□□□□□ -1.78
LIM2P55344 AC011477.5-201ENST00000586571 259 ntBASIC3.95□□□□□ -1.78
LIM2P55344 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.95□□□□□ -1.78
LIM2P55344 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.95□□□□□ -1.78
LIM2P55344 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.95□□□□□ -1.78
LIM2P55344 AC012603.1-201ENST00000606424 528 ntBASIC3.95□□□□□ -1.78
LIM2P55344 MIR7973-1-201ENST00000614683 76 ntBASIC3.95□□□□□ -1.78
LIM2P55344 MIR8059-201ENST00000620427 81 ntBASIC3.95□□□□□ -1.78
LIM2P55344 MIR7702-201ENST00000621931 59 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AC008785.1-201ENST00000624475 456 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AC097372.4-201ENST00000625025 466 ntBASIC3.95□□□□□ -1.78
LIM2P55344 MIR6830-201ENST00000636015 70 ntBASIC3.95□□□□□ -1.78
LIM2P55344 TMEM30CP-203ENST00000637814 1035 ntBASIC3.95□□□□□ -1.78
LIM2P55344 AL118496.1-201ENST00000440201 1812 ntBASIC3.95□□□□□ -1.78
LIM2P55344 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 AC092162.3-201ENST00000624511 1624 ntBASIC3.95□□□□□ -1.78
LIM2P55344 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIM2P55344 AL451142.2-201ENST00000429076 2090 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC000123.3-201ENST00000624029 4975 ntBASIC3.94□□□□□ -1.78
LIM2P55344 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 Z82217.1-201ENST00000625157 8149 ntBASIC3.94□□□□□ -1.78
LIM2P55344 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 SNORA62-201ENST00000365493 153 ntBASIC3.94□□□□□ -1.78
LIM2P55344 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.94□□□□□ -1.78
LIM2P55344 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LIM2P55344 RNU6-178P-201ENST00000384631 104 ntBASIC3.94□□□□□ -1.78
LIM2P55344 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 AL357078.2-201ENST00000416486 427 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC234779.1-201ENST00000425910 285 ntBASIC3.94□□□□□ -1.78
LIM2P55344 BX119904.1-201ENST00000432026 348 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC069285.2-201ENST00000440210 275 ntBASIC3.94□□□□□ -1.78
LIM2P55344 MTND2P6-201ENST00000455337 1030 ntBASIC3.94□□□□□ -1.78
LIM2P55344 METTL15P1-201ENST00000481421 1045 ntBASIC3.94□□□□□ -1.78
LIM2P55344 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 RPS27AP13-201ENST00000498403 237 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC025445.1-201ENST00000502728 300 ntBASIC3.94□□□□□ -1.78
LIM2P55344 RN7SKP122-201ENST00000515923 296 ntBASIC3.94□□□□□ -1.78
LIM2P55344 RNA5SP360-201ENST00000516555 118 ntBASIC3.94□□□□□ -1.78
LIM2P55344 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC138701.1-201ENST00000524329 714 ntBASIC3.94□□□□□ -1.78
LIM2P55344 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 AC022882.1-201ENST00000532142 501 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC107918.3-201ENST00000533272 382 ntBASIC3.94□□□□□ -1.78
LIM2P55344 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.94□□□□□ -1.78
LIM2P55344 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.94□□□□□ -1.78
LIM2P55344 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 AC022655.2-201ENST00000577280 318 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC022884.3-201ENST00000579571 248 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC069366.1-201ENST00000583159 838 ntBASIC3.94□□□□□ -1.78
LIM2P55344 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
LIM2P55344 AC123786.2-201ENST00000603459 275 ntBASIC3.94□□□□□ -1.78
LIM2P55344 MIR6716-201ENST00000613413 80 ntBASIC3.94□□□□□ -1.78
LIM2P55344 MIR1264-201ENST00000616374 69 ntBASIC3.94□□□□□ -1.78
LIM2P55344 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.94□□□□□ -1.78
LIM2P55344 AL023881.1-201ENST00000621088 301 ntBASIC3.94□□□□□ -1.78
LIM2P55344 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 AL450326.2-201ENST00000421913 1962 ntBASIC3.94□□□□□ -1.78
LIM2P55344 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
LIM2P55344 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIM2P55344 AP000756.2-201ENST00000624168 2567 ntBASIC3.94□□□□□ -1.78
LIM2P55344 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LIM2P55344 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms